Detail information of GWHGAAEX008568/evm.TU.scaffold_222.22


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|357386281|ref|YP_004901005.1|2.00E-11hypothetical protein [Pelagibacterium halotolerans B2]
KOGKOG17735.00E-18Stress responsive protein
nrgi|56412215|gb|AAV88602.1|1.07E-28low temperature and salt responsive protein [Cenchrus americanus]
Swissprottr|Q9LRI7|OSR8_ORYSJ6.00E-31Hydrophobic protein OSR8
trEMBLtr|K3ZXW5|K3ZXW5_SETIT3.00E-30Uncharacterized protein {ECO:0000313|EnsemblPlants:Si031447m}
TAIRAT4G306605.00E-18Low temperature and salt responsive protein family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000228903991917493+
Transcript Sequence

Network for GWHGAAEX008568

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01679.16Pmp3591064.10E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms61.570
SRR2545915Juvenile tuber90.710
SRP108465SRR5643513five period of Gastrodia elata170.260
SRR5643514five period of Gastrodia elata169.150
SRR5643515five period of Gastrodia elata174.950
SRR5643524five period of Gastrodia elata173.640
SRR5643525five period of Gastrodia elata238.640
SRR5643528five period of Gastrodia elata179.790
SRR5643658five period of Gastrodia elata228.000
SRR5643659five period of Gastrodia elata186.580
SRR5643660five period of Gastrodia elata177.570
SRR5643661five period of Gastrodia elata193.190
SRR5643662five period of Gastrodia elata200.360
SRR5643663five period of Gastrodia elata195.050
SRR5643664five period of Gastrodia elata199.660
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_195.480
SRR6049655Rhizomagastrodiae_C368-T10_good_1112.790
SRR6049656Rhizomagastrodiae_C368-T07_good_1102.710
SRR6049657Rhizomagastrodiae_C368-T07_good_1102.780
SRR6049658Rhizomagastrodiae_C368-T04_good_180.420
SRR6049659Rhizomagastrodiae_C368-T04_good_180.880
SRR6049660Rhizomagastrodiae_C368-T01_good_185.270
SRR6049661Rhizomagastrodiae_C368-T04_good_185.220
SRR6049662Rhizomagastrodiae_C368-T01_good_1121.220
SRR6049663Rhizomagastrodiae_C368-T01_good_191.870
SRR6049664Rhizomagastrodiae_C368-T10_good_1142.350
SRR6049665Rhizomagastrodiae_C368-T10_good_1142.350
SRP279888GastroGastrodia elata tuber 120.76
JuvenJuvenile tuber76.21
Mother_GastroMother tuber of Gastrodia elata 113.14
Mother_JuvenMother tuber of Juvenile 86.01