Detail information of GWHGAAEX008579/evm.TU.scaffold_223.12


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG07242.00E-25Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains
nrgi|672183904|ref|XP_008812249.1|2.10E-30PREDICTED: protein RADIALIS-like 4 [Phoenix dactylifera]
Swissprottr|F4JVB8|RADL1_ARATH5.00E-26Protein RADIALIS-like 1
trEMBLtr|A0A067E8G3|A0A067E8G3_CITSI1.00E-25Uncharacterized protein {ECO:0000313|EMBL:KDO47527.1}
TAIRAT4G392502.00E-25RAD-like 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000222481981483278-
Transcript Sequence

Network for GWHGAAEX008579

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding6522.40E-10
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB-related

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.070
SRR2545915Juvenile tuber3.300
SRP108465SRR5643513five period of Gastrodia elata0.300
SRR5643514five period of Gastrodia elata2.970
SRR5643515five period of Gastrodia elata1.680
SRR5643524five period of Gastrodia elata1.670
SRR5643525five period of Gastrodia elata58.220
SRR5643528five period of Gastrodia elata40.270
SRR5643658five period of Gastrodia elata49.660
SRR5643659five period of Gastrodia elata21.100
SRR5643660five period of Gastrodia elata6.940
SRR5643661five period of Gastrodia elata25.720
SRR5643662five period of Gastrodia elata20.980
SRR5643663five period of Gastrodia elata24.450
SRR5643664five period of Gastrodia elata24.160
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.370
SRR6049655Rhizomagastrodiae_C368-T10_good_116.940
SRR6049656Rhizomagastrodiae_C368-T07_good_113.410
SRR6049657Rhizomagastrodiae_C368-T07_good_18.460
SRR6049658Rhizomagastrodiae_C368-T04_good_110.140
SRR6049659Rhizomagastrodiae_C368-T04_good_18.200
SRR6049660Rhizomagastrodiae_C368-T01_good_14.390
SRR6049661Rhizomagastrodiae_C368-T04_good_17.800
SRR6049662Rhizomagastrodiae_C368-T01_good_16.510
SRR6049663Rhizomagastrodiae_C368-T01_good_13.230
SRR6049664Rhizomagastrodiae_C368-T10_good_111.450
SRR6049665Rhizomagastrodiae_C368-T10_good_111.450
SRP279888GastroGastrodia elata tuber 26.82
JuvenJuvenile tuber0.46
Mother_GastroMother tuber of Gastrodia elata 0.40
Mother_JuvenMother tuber of Juvenile 0.03