Detail information of GWHGAAEX008596/evm.TU.scaffold_224.19


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672142451|ref|XP_008795080.1|1.25E-22PREDICTED: transcription repressor OFP1 [Phoenix dactylifera]
Swissprottr|Q3E9B4|OFP8_ARATH4.00E-20Transcription repressor OFP8
trEMBLtr|M0RRJ3|M0RRJ3_MUSAM3.00E-23Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P12130_001}
TAIRAT5G196501.00E-19ovate family protein 8

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000231580261581054-
Transcript Sequence

Network for GWHGAAEX008596

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04844.12Ovate1512065.10E-20
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyOFP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.750
SRR2545915Juvenile tuber5.130
SRP108465SRR5643513five period of Gastrodia elata7.720
SRR5643514five period of Gastrodia elata11.230
SRR5643515five period of Gastrodia elata4.560
SRR5643524five period of Gastrodia elata6.850
SRR5643525five period of Gastrodia elata12.120
SRR5643528five period of Gastrodia elata15.020
SRR5643658five period of Gastrodia elata10.010
SRR5643659five period of Gastrodia elata1.200
SRR5643660five period of Gastrodia elata1.750
SRR5643661five period of Gastrodia elata2.660
SRR5643662five period of Gastrodia elata3.180
SRR5643663five period of Gastrodia elata4.420
SRR5643664five period of Gastrodia elata6.080
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.450
SRR6049655Rhizomagastrodiae_C368-T10_good_14.910
SRR6049656Rhizomagastrodiae_C368-T07_good_15.710
SRR6049657Rhizomagastrodiae_C368-T07_good_114.220
SRR6049658Rhizomagastrodiae_C368-T04_good_142.910
SRR6049659Rhizomagastrodiae_C368-T04_good_170.150
SRR6049660Rhizomagastrodiae_C368-T01_good_112.670
SRR6049661Rhizomagastrodiae_C368-T04_good_162.160
SRR6049662Rhizomagastrodiae_C368-T01_good_112.390
SRR6049663Rhizomagastrodiae_C368-T01_good_19.450
SRR6049664Rhizomagastrodiae_C368-T10_good_15.930
SRR6049665Rhizomagastrodiae_C368-T10_good_15.930
SRP279888GastroGastrodia elata tuber 2.89
JuvenJuvenile tuber0.66
Mother_GastroMother tuber of Gastrodia elata 216.76
Mother_JuvenMother tuber of Juvenile 38.47