Detail information of GWHGAAEX008598/evm.TU.scaffold_224.23


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG24012.00E-75Predicted MutS-related protein involved in mismatch repair
nrgi|672142344|ref|XP_008795031.1|2.95E-137PREDICTED: uncharacterized protein LOC103710887 isoform X1 [Phoenix dactylifera]
trEMBLtr|D7SJX9|D7SJX9_VITVI4.00E-94Putative uncharacterized protein {ECO:0000313|EMBL:CBI15955.3}
TAIRAT5G587202.00E-75smr (Small MutS Related) domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000231719793779779+
Transcript Sequence

Network for GWHGAAEX008598

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08590.9DUF17713894494.20E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.610
SRR2545915Juvenile tuber20.130
SRP108465SRR5643513five period of Gastrodia elata18.430
SRR5643514five period of Gastrodia elata20.170
SRR5643515five period of Gastrodia elata20.660
SRR5643524five period of Gastrodia elata23.920
SRR5643525five period of Gastrodia elata14.350
SRR5643528five period of Gastrodia elata16.070
SRR5643658five period of Gastrodia elata13.140
SRR5643659five period of Gastrodia elata12.260
SRR5643660five period of Gastrodia elata12.750
SRR5643661five period of Gastrodia elata13.140
SRR5643662five period of Gastrodia elata10.470
SRR5643663five period of Gastrodia elata11.650
SRR5643664five period of Gastrodia elata10.030
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.960
SRR6049655Rhizomagastrodiae_C368-T10_good_115.230
SRR6049656Rhizomagastrodiae_C368-T07_good_110.740
SRR6049657Rhizomagastrodiae_C368-T07_good_114.100
SRR6049658Rhizomagastrodiae_C368-T04_good_19.840
SRR6049659Rhizomagastrodiae_C368-T04_good_110.590
SRR6049660Rhizomagastrodiae_C368-T01_good_110.660
SRR6049661Rhizomagastrodiae_C368-T04_good_19.400
SRR6049662Rhizomagastrodiae_C368-T01_good_112.220
SRR6049663Rhizomagastrodiae_C368-T01_good_19.030
SRR6049664Rhizomagastrodiae_C368-T10_good_115.100
SRR6049665Rhizomagastrodiae_C368-T10_good_115.100
SRP279888GastroGastrodia elata tuber 9.96
JuvenJuvenile tuber14.66
Mother_GastroMother tuber of Gastrodia elata 27.64
Mother_JuvenMother tuber of Juvenile 25.67