Detail information of GWHGAAEX008600/evm.TU.scaffold_224.26_evm.TU.scaffold_224.28


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743800232|ref|XP_010925830.1|0PREDICTED: uncharacterized protein LOC105048266 [Elaeis guineensis]
trEMBLtr|A0A067JEE6|A0A067JEE6_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP22211.1}
TAIRAT5G626506.00E-150Tic22-like family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000231853059943747+
Transcript Sequence

Network for GWHGAAEX008600

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04278.11Tic222293055.30E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0015031Biological Processprotein transport

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms25.010
SRR2545915Juvenile tuber34.870
SRP108465SRR5643513five period of Gastrodia elata26.460
SRR5643514five period of Gastrodia elata25.520
SRR5643515five period of Gastrodia elata23.080
SRR5643524five period of Gastrodia elata22.830
SRR5643525five period of Gastrodia elata23.830
SRR5643528five period of Gastrodia elata23.780
SRR5643658five period of Gastrodia elata30.200
SRR5643659five period of Gastrodia elata30.530
SRR5643660five period of Gastrodia elata30.760
SRR5643661five period of Gastrodia elata28.080
SRR5643662five period of Gastrodia elata39.260
SRR5643663five period of Gastrodia elata37.360
SRR5643664five period of Gastrodia elata38.070
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_132.870
SRR6049655Rhizomagastrodiae_C368-T10_good_131.780
SRR6049656Rhizomagastrodiae_C368-T07_good_130.010
SRR6049657Rhizomagastrodiae_C368-T07_good_133.910
SRR6049658Rhizomagastrodiae_C368-T04_good_128.690
SRR6049659Rhizomagastrodiae_C368-T04_good_129.690
SRR6049660Rhizomagastrodiae_C368-T01_good_130.090
SRR6049661Rhizomagastrodiae_C368-T04_good_127.150
SRR6049662Rhizomagastrodiae_C368-T01_good_125.700
SRR6049663Rhizomagastrodiae_C368-T01_good_127.600
SRR6049664Rhizomagastrodiae_C368-T10_good_125.000
SRR6049665Rhizomagastrodiae_C368-T10_good_125.000
SRP279888GastroGastrodia elata tuber 39.43
JuvenJuvenile tuber39.84
Mother_GastroMother tuber of Gastrodia elata 15.69
Mother_JuvenMother tuber of Juvenile 23.32