Detail information of GWHGAAEX008604/evm.TU.scaffold_224.32


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|389876490|ref|YP_006370055.1|5.00E-134peroxisomal bifunctional enzyme [Tistrella mobilis KA081020-065]
KOGKOG16830Hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase
nrgi|672192600|ref|XP_008775812.1|0PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional protein-like [Phoenix dactylifera]
Swissprottr|Q8W1L6|MFP_ORYSJ03-hydroxyacyl-CoA dehydrogenase
trEMBLtr|M0THH9|M0THH9_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P14420_001}
TAIRAT4G290100Enoyl-CoA hydratase/isomerase family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000023110019191040146+
Transcript Sequence

Network for GWHGAAEX008604

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00378.19ECH_1142124.40E-39
PF02737.173HCDH_N3114876.20E-52
PF00725.213HCDH4905831.30E-18
PF00725.213HCDH6227062.10E-05
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K10527MFP2 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Fatty acid metabolismmap01212
Fatty acid degradationmap00071
alpha-Linolenic acid metabolismmap00592

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0006631Biological Processfatty acid metabolic process
GO:0016491Molecular Functionoxidoreductase activity
GO:0003857Molecular Function3-hydroxyacyl-CoA dehydrogenase activity
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms58.680
SRR2545915Juvenile tuber36.430
SRP108465SRR5643513five period of Gastrodia elata11.680
SRR5643514five period of Gastrodia elata13.610
SRR5643515five period of Gastrodia elata23.810
SRR5643524five period of Gastrodia elata22.630
SRR5643525five period of Gastrodia elata67.680
SRR5643528five period of Gastrodia elata61.950
SRR5643658five period of Gastrodia elata44.060
SRR5643659five period of Gastrodia elata24.610
SRR5643660five period of Gastrodia elata23.340
SRR5643661five period of Gastrodia elata24.740
SRR5643662five period of Gastrodia elata26.980
SRR5643663five period of Gastrodia elata24.020
SRR5643664five period of Gastrodia elata22.790
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.010
SRR6049655Rhizomagastrodiae_C368-T10_good_19.140
SRR6049656Rhizomagastrodiae_C368-T07_good_111.810
SRR6049657Rhizomagastrodiae_C368-T07_good_112.610
SRR6049658Rhizomagastrodiae_C368-T04_good_114.830
SRR6049659Rhizomagastrodiae_C368-T04_good_120.350
SRR6049660Rhizomagastrodiae_C368-T01_good_117.730
SRR6049661Rhizomagastrodiae_C368-T04_good_116.930
SRR6049662Rhizomagastrodiae_C368-T01_good_118.080
SRR6049663Rhizomagastrodiae_C368-T01_good_119.620
SRR6049664Rhizomagastrodiae_C368-T10_good_115.800
SRR6049665Rhizomagastrodiae_C368-T10_good_115.800
SRP279888GastroGastrodia elata tuber 24.39
JuvenJuvenile tuber12.13
Mother_GastroMother tuber of Gastrodia elata 74.60
Mother_JuvenMother tuber of Juvenile 43.29