Gene detail

Detail information of GWHGAAEX008610/evm.TU.scaffold_226.8

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000226	127915	129332	+

Transcript Sequence
>GWHTAAEX008610 GTGGAAAACCCAAGAATGAGAAAACAACGGAGCCACACCACAGAAAATATCCACTAAGAATCTTGAAAAGTACAGAATTACAAAGAGCTTAACTTTTGATAGAAAACACACAAGCTCTTACTCTAAAATGAAAAGGAGAGGAAGCAACCACCACCAGGAGTATCTTCTCCAACATGCAAGAGCTCTCTTGCACTGCAGCTTTCTTAGGGCTTCACCTTAAGATATCCTCCTCACAACAGCTAAAGCCTCTCAATCTGAAATGCCAACTTCTTAGATTACATAAGAAACTCCTCCACATATTCCCTTAAGCACCCAACTCATTTTCAGACCTCAAATGGTCCAAAATTCCCTCCAAACTACTTAGGGCGTAACTTGAAACCAGAGCAAGACTCCGCCAAGCACTACGGCGAGCCGTAGCTCCTAGGTCTCGGGTAGTCAGGCACCGGGGCAAGCTGCAGCACCCTAGTTATCTAATAGCCTGCCGCTGCAGCGCGCAAGAGCGCCCGCCTCTCTGGTTGCCTGCCGCTGCTGCGCACTGTAGTGCCCGCCTCTCGCAACAAGTCCCGCTGCGGCGCGCCGCAGCACCGATTTCCGCTACGGTGCGCGGTAGCGCTCGCTCCTTTGTTTGCAGACCGCTGAGGCACGTGAAAGCGCCTCCATTTCGGGTGAGGGGCCGCCAAGGAGCACTGCAGCAACACCTGTGTTGTTCCTGAACTTCATGTCTTGTTCCGAATTGCCTTGGTACCTCCTAGAAGCTCACCGGAGCCATTAACATCTCCATGAAGGACAAGTGGTCTCCACAACACAACATGTACAACCATAAGAGAAGATTAAGGAGCTTGAAAGTGGAGTCCGAATTCACATATTTTCTGATCAGCAGGTCGACTATTCCATGAAGACCAAAGCTCAGAGCCCTTTTTGCGACAAAGTAAGCAGCCTTCATGAGCTCGGCCTCCGCCAGGATCTCCAGTAGGGCGCAGAAAGGGGTCTCTGATCGGTAGAAGCCCGGCTGTCGCTCGGCCCAACGAAAGAATCGCAAAGCAACGCGAGGCTCGTTTATGACGGAATGAATGGCGCAGAGGAAAAGATCACGATCAGCTATCGAGGGCTTCAGCTGGGTGGGAGCTCGAAAACCGGAGGTGAATGCTTGAGGATTGAATCTTAAAATCCCCAAAATGAGGGAATCGAACAATAAATTTTCGGTGAGAAGCTTGGAGAAGGGTTTGCAAGGGGAGAGGAGAAGAGGCGATCAGAAGAAAGAGAAGAAGGTGGCGGATGTTGATGCTAAGTATTTGAAGGAACTGGTGAGGAAGAGCATCTACCTCCGCGTTCTTGCCAAGGAGGGCAAGCGAACGAGATGGTCAGATCTTCGCGGGATACCAAGCGGGGGAGGAGGGCGAGCGAACAAGGAGCACTAA

Network for GWHGAAEX008610

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module3

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.900
SRP064423	SRR2545915	Juvenile tuber	0.190
SRP108465	SRR5643513	five period of Gastrodia elata	10.720
	SRR5643514	five period of Gastrodia elata	5.820
	SRR5643515	five period of Gastrodia elata	10.370
	SRR5643524	five period of Gastrodia elata	4.900
	SRR5643525	five period of Gastrodia elata	7.670
	SRR5643528	five period of Gastrodia elata	4.370
	SRR5643658	five period of Gastrodia elata	8.500
	SRR5643659	five period of Gastrodia elata	33.560
	SRR5643660	five period of Gastrodia elata	43.600
	SRR5643661	five period of Gastrodia elata	37.430
	SRR5643662	five period of Gastrodia elata	20.960
	SRR5643663	five period of Gastrodia elata	33.490
	SRR5643664	five period of Gastrodia elata	19.950
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.470
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	6.350
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	2.600
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.090
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.300
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	2.320
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.000
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	1.420
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.120
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.120
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.120
SRP279888	Gastro	Gastrodia elata tuber	18.21
	Juven	Juvenile tuber	19.24
	Mother_Gastro	Mother tuber of Gastrodia elata	8.17
	Mother_Juven	Mother tuber of Juvenile	11.02