Detail information of GWHGAAEX008612/evm.TU.scaffold_226.10
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|295135634|ref|YP_003586310.1| | 2.00E-78 | N-acetylglucosaminyl transferase [Zunongwangia profunda SM-A87] |
| nr | gi|743874044|ref|XP_010906977.1| | 4.12E-151 | PREDICTED: uncharacterized protein LOC105033764 [Elaeis guineensis] |
| trEMBL | tr|D7SJ39|D7SJ39_VITVI | 4.00E-146 | Putative uncharacterized protein {ECO:0000313|EMBL:CBI15500.3} |
| TAIR | AT1G73740 | 8.00E-100 | UDP-Glycosyltransferase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000226 | 182360 | 190215 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX008612
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF03033.19 | Glyco_transf_28 | 112 | 252 | 5.10E-31 |
| PF04101.15 | Glyco_tran_28_C | 300 | 463 | 1.70E-33 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT28 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K02563 | murG | Metabolic pathways | map01100 |
| Peptidoglycan biosynthesis | map00550 | ||
| Cell cycle - Caulobacter | map04112 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0030259 | Biological Process | lipid glycosylation |
| GO:0005975 | Biological Process | carbohydrate metabolic process |
| GO:0050511 | Molecular Function | undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity |
| GO:0016758 | Molecular Function | transferase activity, transferring hexosyl groups |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.560 |
| SRR2545915 | Juvenile tuber | 1.970 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 2.680 |
| SRR5643514 | five period of Gastrodia elata | 3.220 | |
| SRR5643515 | five period of Gastrodia elata | 5.210 | |
| SRR5643524 | five period of Gastrodia elata | 2.120 | |
| SRR5643525 | five period of Gastrodia elata | 3.440 | |
| SRR5643528 | five period of Gastrodia elata | 3.880 | |
| SRR5643658 | five period of Gastrodia elata | 2.660 | |
| SRR5643659 | five period of Gastrodia elata | 3.090 | |
| SRR5643660 | five period of Gastrodia elata | 2.230 | |
| SRR5643661 | five period of Gastrodia elata | 4.750 | |
| SRR5643662 | five period of Gastrodia elata | 3.780 | |
| SRR5643663 | five period of Gastrodia elata | 3.020 | |
| SRR5643664 | five period of Gastrodia elata | 5.820 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 4.580 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 4.750 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 4.250 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 4.380 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 1.570 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 1.680 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 4.390 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 4.250 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 6.640 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 3.990 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 3.220 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 3.220 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 1.55 |
| Juven | Juvenile tuber | 0.90 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 3.97 | |
| Mother_Juven | Mother tuber of Juvenile | 0.90 |