Gene detail

Detail information of GWHGAAEX008615/evm.TU.scaffold_226.14

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|374310025\|ref\|YP_005056455.1\|	5.00E-13	Uridine kinase [Granulicella mallensis MP5ACTX8]
KOG	KOG4203	0	Armadillo/beta-Catenin/plakoglobin
nr	gi\|743823909\|ref\|XP_010932643.1\|	0	PREDICTED: uncharacterized protein LOC105053245 [Elaeis guineensis]
Swissprot	tr\|O65583\|UKL4_ARATH	2.00E-07	Putative uracil phosphoribosyltransferase
trEMBL	tr\|A0A061E8J5\|A0A061E8J5_THECC	0	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1 {ECO:0000313\|EMBL:EOY00978.1}
TAIR	AT2G01460	0	P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000226	215663	280673	+

Transcript Sequence
>GWHTAAEX008615 ATGGGTCTTTCTCAAGTAAGAGAGAAGGGAATTGTTGTGGGGCTTCTTCTAAGAGTTTCAGAGGCTCTCTATGCGGTCACGCAAGTCACGAGCACTGGCCGGACTGCACCAGATTATTTTCGGAGTACCACCATATTCCCTTTCATGGAGGACGAGTTGCTCCTCCAAAGGGTTTTGGAAGAAGGGGGCCGCGACCTTTACTTCCCTGCTCCTATCTCTCCTCCACCGGCAAGCTCCTCTTCTAATGCCGCTTCTGCCTCCTCGCTGTCTTCAATCCTTCAGTCCCTTCCTCTTCATGCGTCCTTCGATCATGGATACTATCTCCTCGTGAAATCCATTCAGGAGCTTCGAGAGAAGAAAGAGGGCGGCGCCGTCACCGTCGGCATAGGTGGCCCCAGCGGCTCCGGTAAGACGAGCTTAGCTGAGAAGGTTGGGTCCCTCCTCGGATGTGCTGTCATTTCCATGGAGAACTTTCGCAGTGACGCTGATGAAGGGAATGATCTGGACTCAATAGATTTTAATGCTCTTGCACATAACCTGGAGGATTTGATAAAGGGGAAGGACACACTGGTTCCTTTGTTTAATTTCCAAGAGAAGAAACGTGTTGGCATGAAGCCAGTGACGACACCTCCTTCCAGAGTGGTGATTGTTGATGGTGCTTATGCTTTACATTCAACCCTTAGGTCTCTGCTTGACATCAGGGTTGCTGTGGTTGGAGGTGTTCATTTTAGCCTTCTATCCAAAGTTCGGCATGACATAGGAGATTCATGTTCTCTGGACTATCTCATTGACAGTATATTTCCTCTTTTCAGGAAGCACATTGAACCTGATCTCCATCATGCCCAGATCAGAATCAATAATAGCTTTGTTTCATCTTTCAGAGATGCTTATTATAAGCTGAAGTGCAGAAGTGAGTTCCTTAAAGAACTGACAAAATACTTTTCTGATCAACACAAAGCTGAAACTGAGAATTTGATTGAGATGTATCTTCGCCCCCCACGTGCAAGTGAAGAAGCAAGTATAAATGATTGGATAAAGGTTCGACAATCTGGCATAAGATATTATCTTTCTTTAGGTGACCAGAGGATCGTTGACAAAAACTTTATTATTCGACCAAAAGCTGAGTTTGAGGTTGGAAGAACCACCCTAGGGGGTTTGCTTGCATTAGGCTACAATGTTGTTGTCAGCTTCAAGCGTTCATGTACATTGATTGTTGATGGTCAACTGCATATGGCATTAGAAAGTATTGACACACTCAATGAGACATTTCTGGTATTGAAGGGTACAAGCAGAAAGGCAATACGAGATGAAGCTTCCAGACTTGGCATTACAGGTCCATGGATCACAAAATCATATCTAGAGATGATTTTAGAAAGCAAAGGGGTTCCTCGTCTCAACACTCCACCACCTACATCCAGTGGACTTTTAATTGAGAGTCAGGAGAGGGCTATTGCTGGTCCTAAGCCTATCCACTTAGCAACAAATGCTGTTTTTAGGCCTGATTATTTTGCACAGCCATGGACTCGATCTCCAAAGAAGGCTGACATTGACCGTGTGGTGGCAACATGGACCTTTGTTTCAGATTCTTCTGCTTTCAGGGATAACGTTCATCTGGTTCCAATGCCTGATTCATATGATTTTGATCGGGGATTGCTTTTTGCTGTGCAAGCAATTCAGATTTTACTGGAGAAGAAAGGCTTCCCCATTGTCGTTGGGATTGGTGGTCCCAGTGGATCAGGCAAAACTAGCTTGGCTCAGAAAATGGCGAATATTGTTGGCTGTGAAGTAATCCCATTGGAGAGTTATTACAAATCTAAACAAGTGCAGGATTTGAAGCATGATGATTTTAACACATTGGATTTGTTATTGTTATCGAAGAATATTGAAGATATTAGGACACACCATAAAGCAAAGGTGCCTTGCTTTGATTTTGAGAATTCTACCCGGAACGGCTTTAGGGAACTCCTGGTTTCTGAGGAATGTGGAGTGGTCATCTTTGAAGGGGTGTACGCATTACATCCAGAAATAAGGAGAAATCTTGACTTGTGGATTGCTGTTGTTGGCGGCGTCCATTCTCATCTAATCGCAAGAGTTATGAGAGACAAAAATCGAAATTATAGTTCTATTTCTCAGGATGAAATAATGAGAACAGTATTTCCAATGTTTCAACAGCATATTGAGCCTCATCTTGTACATGCACATCTAAAGATTCGTAATGACTTTGATCCTGTACTTTCTCCTGAAAGCTCTCTTTTTGTTCTGAAAAGCAACAAGCAGGTTGCATACCAAGACATCCTGAAAGTGCTTGATCCAAACAAGATTTGCATTTCTGTGCAGAACTTCATTGATATATATTTAAAATTGCCTGGAAAACCATCAAATGGGCGCCTGACAGAATGTGAGTGCATACGAGTTAGAATATGTGAGGGAAGATTTGCATTATTAATAAGGGAGCCCATTATTGAGGGAAATTTCATTGTACAACCAAAAGTTGATTTTGATATTAGTGTCAGCACTGTTGCAGGTCTTCTTAATCTTGGGTATCAAGCTGTGGCTTATATTGAAGCGTCTGCTTTAATTTACCAAGATGGGAAGATTCTTGTTGAGGTTGATCACTTGCAGAATGCACATTGCCCCTATCTTCAAATTAAAGGAGCAAATAAAGAAGTTGTAATAGCTGCTGCTACAATACTTAGTTTGGATGGTTCGTACACAACAAAAACATATCTTCAAATTATTCTTGAAAGTCTGCCATCTTCTGAAAGAGCCTCCAATGGAATTTATTATCAACAAGCAGCTAGACTTCTAGAACTTGTGGAGTTTATTCAATCCCAAGGAGGGAGCTGCAGCATAGAGTCTTCGACAAGCAGAGAAATTCTTCCTGCTAATGGTAACATCTTCGAGGATTTGCAATCCAAAATAAAGAAGCTTGAGAGATGGCGAACGATTGATATGGCCCTGTGGACCTTCTTACTGTCTGCTCTTGTCGGTTATACGTTGTATCAAAGGCGCCATCATTAATAGCAAACATTCAAAAGATTGACAGAATTTACAGACTGATTATATACTACCTTTGTTTTCATATGTTCTGGACCTAAACAAAGTCTTAGAGGTAAAATGAGTGATCATTGCACCAGAGCTTCTCTGTTTTTTAGGTATCCGACTCTTTTGACTGTTTGGAAAGAGGTTCAAGCAGATTGGGTCTCTTTTCCTCAAATATGCAGGTCCTTTTGAGTTTCGAATTGCTGTTGCTTTTAATACTGCAGAAATGTGGGGGCTTGACTTCATCTAGACAGGCATGATTGACTGTTAATTTATTTTAATTTTTTTAATAAGTTTCTGTTTTATTCTTTTTAGATTGCTGCTCTTCTTAAATATTGAACCCCAATTGTACACAACCATTACATGAGAAAGTGAAGGCCATCTCAATACTTTATTCTTGCAGAATGGTTTAAAATATGATGCTTTGAGAATATGTCGCTCTTTATAGTGATGTATGGGTAGTTATTGGCATGCCACATGATTGATTGAGAGTGATAATTACATGGTAGTGAAAGAGGCTTTCTCC

Network for GWHGAAEX008615

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00485.17	PRK	127	285	5.80E-08
PF00485.17	PRK	570	737	2.00E-13

Protein Sequence

>GWHPAAEX008615
MGLSQVREKGIVVGLLLRVSEALYAVTQVTSTGRTAPDYFRSTTIFPFMEDELLLQRVLEEGGRDLYFPAPISPPPASSSSNAASASSLSSILQSLPLHASFDHGYYLLVKSIQELREKKEGGAVTVGIGGPSGSGKTSLAEKVGSLLGCAVISMENFRSDADEGNDLDSIDFNALAHNLEDLIKGKDTLVPLFNFQEKKRVGMKPVTTPPSRVVIVDGAYALHSTLRSLLDIRVAVVGGVHFSLLSKVRHDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFRDAYYKLKCRSEFLKELTKYFSDQHKAETENLIEMYLRPPRASEEASINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRTTLGGLLALGYNVVVSFKRSCTLIVDGQLHMALESIDTLNETFLVLKGTSRKAIRDEASRLGITGPWITKSYLEMILESKGVPRLNTPPPTSSGLLIESQERAIAGPKPIHLATNAVFRPDYFAQPWTRSPKKADIDRVVATWTFVSDSSAFRDNVHLVPMPDSYDFDRGLLFAVQAIQILLEKKGFPIVVGIGGPSGSGKTSLAQKMANIVGCEVIPLESYYKSKQVQDLKHDDFNTLDLLLLSKNIEDIRTHHKAKVPCFDFENSTRNGFRELLVSEECGVVIFEGVYALHPEIRRNLDLWIAVVGGVHSHLIARVMRDKNRNYSSISQDEIMRTVFPMFQQHIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKQVAYQDILKVLDPNKICISVQNFIDIYLKLPGKPSNGRLTECECIRVRICEGRFALLIREPIIEGNFIVQPKVDFDISVSTVAGLLNLGYQAVAYIEASALIYQDGKILVEVDHLQNAHCPYLQIKGANKEVVIAAATILSLDGSYTTKTYLQIILESLPSSERASNGIYYQQAARLLELVEFIQSQGGSCSIESSTSREILPANGNIFEDLQSKIKKLERWRTIDMALWTFLLSALVGYTLYQRRHH

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005524	Molecular Function	ATP binding
GO:0016301	Molecular Function	kinase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	32.960
SRP064423	SRR2545915	Juvenile tuber	22.000
SRP108465	SRR5643513	five period of Gastrodia elata	12.870
	SRR5643514	five period of Gastrodia elata	12.130
	SRR5643515	five period of Gastrodia elata	11.340
	SRR5643524	five period of Gastrodia elata	11.310
	SRR5643525	five period of Gastrodia elata	12.600
	SRR5643528	five period of Gastrodia elata	10.790
	SRR5643658	five period of Gastrodia elata	12.270
	SRR5643659	five period of Gastrodia elata	11.640
	SRR5643660	five period of Gastrodia elata	11.460
	SRR5643661	five period of Gastrodia elata	11.580
	SRR5643662	five period of Gastrodia elata	12.490
	SRR5643663	five period of Gastrodia elata	11.910
	SRR5643664	five period of Gastrodia elata	12.230
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	15.470
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	12.470
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	15.350
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	18.700
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	18.390
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	21.020
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	17.720
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	14.840
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	13.870
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	14.500
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	15.090
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	15.090
SRP279888	Gastro	Gastrodia elata tuber	17.30
	Juven	Juvenile tuber	21.44
	Mother_Gastro	Mother tuber of Gastrodia elata	13.86
	Mother_Juven	Mother tuber of Juvenile	19.61