Detail information of GWHGAAEX008621/evm.TU.scaffold_226.21


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|311109227|ref|YP_003982080.1|2.00E-18glutaredoxin [Achromobacter xylosoxidans A8]
KOGKOG17522.00E-51Glutaredoxin and related proteins
nrgi|743851568|ref|XP_010940165.1|8.09E-55PREDICTED: glutaredoxin-like [Elaeis guineensis]
Swissprottr|P55143|GLRX_RICCO5.00E-55Glutaredoxin
trEMBLtr|B9SFA4|B9SFA4_RICCO4.00E-53Glutaredoxin-1, grx1, putative {ECO:0000313|EMBL:EEF37692.1}
TAIRAT5G403702.00E-51Glutaredoxin family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000226472793489168+
Transcript Sequence

Network for GWHGAAEX008621

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00462.23Glutaredoxin15771.70E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0045454Biological Processcell redox homeostasis
GO:0015035Molecular Functionprotein disulfide oxidoreductase activity
GO:0009055Molecular Functionelectron carrier activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms263.030
SRR2545915Juvenile tuber405.590
SRP108465SRR5643513five period of Gastrodia elata694.400
SRR5643514five period of Gastrodia elata1101.960
SRR5643515five period of Gastrodia elata795.190
SRR5643524five period of Gastrodia elata1043.940
SRR5643525five period of Gastrodia elata615.470
SRR5643528five period of Gastrodia elata567.850
SRR5643658five period of Gastrodia elata465.060
SRR5643659five period of Gastrodia elata526.820
SRR5643660five period of Gastrodia elata509.870
SRR5643661five period of Gastrodia elata516.950
SRR5643662five period of Gastrodia elata481.760
SRR5643663five period of Gastrodia elata508.660
SRR5643664five period of Gastrodia elata568.770
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1458.490
SRR6049655Rhizomagastrodiae_C368-T10_good_1531.320
SRR6049656Rhizomagastrodiae_C368-T07_good_1525.260
SRR6049657Rhizomagastrodiae_C368-T07_good_1360.100
SRR6049658Rhizomagastrodiae_C368-T04_good_1339.790
SRR6049659Rhizomagastrodiae_C368-T04_good_1314.640
SRR6049660Rhizomagastrodiae_C368-T01_good_1301.170
SRR6049661Rhizomagastrodiae_C368-T04_good_1299.550
SRR6049662Rhizomagastrodiae_C368-T01_good_1515.880
SRR6049663Rhizomagastrodiae_C368-T01_good_1440.780
SRR6049664Rhizomagastrodiae_C368-T10_good_1806.100
SRR6049665Rhizomagastrodiae_C368-T10_good_1806.100
SRP279888GastroGastrodia elata tuber 659.93
JuvenJuvenile tuber1,050.81
Mother_GastroMother tuber of Gastrodia elata 600.65
Mother_JuvenMother tuber of Juvenile 882.36