Gene detail

Detail information of GWHGAAEX008627/evm.TU.scaffold_226.30

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|20090798\|ref\|NP_616873.1\|	1.00E-45	hypothetical protein MA1950 [Methanosarcina acetivorans C2A]
KOG	KOG2142	1.00E-36	Molybdenum cofactor sulfurase
nr	gi\|743758050\|ref\|XP_010924812.1\|	0	PREDICTED: molybdenum cofactor sulfurase-like [Elaeis guineensis]
Swissprot	tr\|Q9C5X8\|MOCOS_ARATH	3.00E-24	Molybdenum cofactor sulfurase {ECO:0000255\|HAMAP-Rule:MF_03050}
trEMBL	tr\|A9S748\|A9S748_PHYPA	1.00E-100	Predicted protein {ECO:0000313\|EMBL:EDQ73008.1}
TAIR	AT5G51920	1.00E-36	Pyridoxal phosphate (PLP)-dependent transferases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000226	652539	677527	+

Transcript Sequence
>GWHTAAEX008627 AGTCGTTCGTTTCGTTTGATTGAAACATTAAAAAAAAAATTAAGAGCACACAAATTACTTTACAAATTATTATATTATAATCAGTTTGCCTTACTTTCATATTATTTAGATTTTTTCATATCAAACAACATTTATTAGTTTAAAGGAGAAAAAAAATTAAAAAAATCTCAGTTTTTCTTATAGAAATCATCTAGTTTGAGTAGAATAGCATTTTTCTCAAAATTTTTACTGGGTCCGATATTCAAATGGAAACCGAGACCTGGTCCTCGTGCGCTACGGTAGTTGAAGAGATGACAAAGCTTTTGATCTTCTTCGTGCACCTAATCCTGCCTGCAATTCCAATCTATCTCGGCCGCCGTCGTTCGCCCTTTCCCTTTGCTTCACATCATCAACGAACTGGCCATGTATGCGAAGCTCGCGACTTTGCGGAGCAAGGGAGCTATTCCTCAGGTGTTATATTACAGCATGTTTGTATGTGTCAGCTATTATGGTAAAAGGGAAGCTTCTAGCGTGCGGTTTATGTTGCTTCTAAAACCCTTAGTCTGCAAAATTGTTTTTCTTTTTAGCTCTGAATAGTGACCAGCTGTATGCTGTGTAGAGGGGGAAGAAACTTGATCATGAACGCTTTAGTTCCCATAACCTTTCTACAGAAGTTGACAATTGGATGGAAGATGAATTCTACTTTTCTCAATATTCTATGCCAGCGTTTAGTTCAACTCCAGAAGGCATACTTTAGGAATCAGCATCCCTAAGCTCCAAATCATACAGCACTTCATCACTATTCTCACAAAGAAACTCAAACTTACACTCTTTTAAGTCATCTTCTTCCGACACCAACAAGGAAAGCTTCACCCACCCTTCGCCCCAGTTCATGAATATTATTGGTAATCCAAGCTTCATTTCTTTTGAAGAGGCTGAAGAACAGTTTTTGGAAGACTATGAAGGATATTTTCTTCACTTGTCTGTGGATAATGTGCCCAAGGACCAATATCCTATGCTTGAAACATCTGAATTGATATATTTGGATCATGCAACATGTCCGCTTTACTCTCGTTTTCAGGTGCAACAGTACATGAAGTTTCTACTTGATGAGACCGAATCGTTCAGATTAAATTATATTGTTGACCAACAAGTTACTTTAAGGAGTCGTCCCTATATTGACCCAGTATATCATAAAATCTTAAATATTCTTAACACTACCCTAGAAGATTATTCAGTAGTATTTACTCCAGGGCTTGCATCATGTTACCGTCTCTTCACTGAAATGCTTGAGTTAAAGAAAGGTAGTCTTATACTAGCCAGTCCTGACCATCACAGTTCAGTGCAGTACATTCTTAAAGCTGCAGCTCAATGCAATGCCAAAATTGTAGGTATTCCTCTGAAAGAGAGAGATTTGTCAATAGATGGTACTGAAATGCACAAATTTTTGAGAAAAAAAGGATGGAGCAGCCAAGGGTCAGGTGTTCTTATGTACTCAGCACAGACACTGTCAACTGGGATGTGCCATTCTATGAGCTGGATAACTAGCGCACAGCAAAATGGATGGAAAGTTCTTCTTGATGTTTCCAGTTCCCTTCCCATGATTAGTATTGACCTCTCTACATACCATCCTGAATTTGTGATAGGATCCTTGCACCACATGCTTGGTTATCCCACTGGTCTCTGTTTCATACTGGTTCGAAGGTGTTCTTATTCCATTTGTACAAAACAAGGATGTCGAGAGTTACAATTCATTGAGCATCCAGAACATGGGAAGTCAGTTCATGTCGCAACAGAAGGGGAGAATTTGACTACGCATTTGTTTGCAGCTACGAGTTTTGGATTTGATCATTTAGAGAGCATTGGTATTACACCGATTCAGAGGAGAGTGGAGAGCTTGATTGCTTGGTTGATTAAAACTTTGAAATCTCTATGTCATAAGATGCTTAAAAATCCTCTTATTCAGCTATACGGATCATTGGATGTGAAGTATAGAGGTTCTATAATGGCATTTAATATTTTAGACCCAACCGGACATATATTTCCAGCTAGAGCAGTTCAGCAGCTGGCACTGAAAGACAACATTGTATTGGGCTGTTGCAGTCTTATTGATGTAAAACATAAAAATCTCTTTCAACCAAAATCAAATAAGCTGATGGAATGTGTGCATCTTGACTCATCCTTATGCAATCTTCGCGTTCTTCGCCTTTCCCTCGGCCCTGTTTCAGCATTTAATGATGCCTATCGGCTGGTGCTATTTATATCGAAATTCAGGGAGGAAAATTACATGTCGTACATAGCAGCTGGATACGCAGAAGAGATTGAGAATGAATGCTGATCGTGGGCATATTAACACGGGCTATTGATGGCGCCATGTGTTGATACCCGTCTTTTTGATGGCACATGGATCGCTGCTGGTATCTTTAGCGGTTTGCATTTATGCGATGTCATTCTTACTATTTTTTCTTCTTTTGTTTATATTCTTATATGTATAATATTCAATATGTATTAATTTGTATTGGCTATCATGAATTAGCAATAATACATAATCTTAAATATCTTAATTGAGC

Network for GWHGAAEX008627

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00266.18	Aminotran_5	107	376	7.00E-14

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003824	Molecular Function	catalytic activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.680
SRP064423	SRR2545915	Juvenile tuber	0.730
SRP108465	SRR5643513	five period of Gastrodia elata	1.170
	SRR5643514	five period of Gastrodia elata	0.960
	SRR5643515	five period of Gastrodia elata	1.380
	SRR5643524	five period of Gastrodia elata	1.450
	SRR5643525	five period of Gastrodia elata	0.460
	SRR5643528	five period of Gastrodia elata	0.670
	SRR5643658	five period of Gastrodia elata	0.590
	SRR5643659	five period of Gastrodia elata	0.490
	SRR5643660	five period of Gastrodia elata	0.590
	SRR5643661	five period of Gastrodia elata	0.140
	SRR5643662	five period of Gastrodia elata	0.350
	SRR5643663	five period of Gastrodia elata	0.270
	SRR5643664	five period of Gastrodia elata	0.420
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	2.210
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	1.140
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	1.800
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	1.800
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.290
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.360
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	2.780
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.950
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	3.360
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.210
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	2.630
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	2.630
SRP279888	Gastro	Gastrodia elata tuber	1.00
	Juven	Juvenile tuber	1.11
	Mother_Gastro	Mother tuber of Gastrodia elata	7.67
	Mother_Juven	Mother tuber of Juvenile	5.77