Detail information of GWHGAAEX008631/evm.TU.scaffold_226.37


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16771.00E-58CCCH-type Zn-finger protein
nrgi|672162205|ref|XP_008800937.1|1.82E-106PREDICTED: zinc finger CCCH domain-containing protein 9-like [Phoenix dactylifera]
Swissprottr|A2ZVY5|C3H9_ORYSJ5.00E-71Zinc finger CCCH domain-containing protein 9
trEMBLtr|M0SMY6|M0SMY6_MUSAM4.00E-76Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P11210_001}
TAIRAT1G682001.00E-58Zinc finger C-x8-C-x5-C-x3-H type family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000226863471865525+
Transcript Sequence

Network for GWHGAAEX008631

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00642.23zf-CCCH2843103.10E-11
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC3H

KEGG pathway

KO Enzyme pathway mapID
K18753ZFP36L Cellular senescence map04218

Gene Ontology

GO term OntologyName
GO:0046872Molecular Functionmetal ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.050
SRR2545915Juvenile tuber0.240
SRP108465SRR5643513five period of Gastrodia elata0.770
SRR5643514five period of Gastrodia elata0.740
SRR5643515five period of Gastrodia elata1.790
SRR5643524five period of Gastrodia elata1.230
SRR5643525five period of Gastrodia elata1.700
SRR5643528five period of Gastrodia elata3.490
SRR5643658five period of Gastrodia elata3.670
SRR5643659five period of Gastrodia elata2.600
SRR5643660five period of Gastrodia elata0.880
SRR5643661five period of Gastrodia elata1.690
SRR5643662five period of Gastrodia elata9.330
SRR5643663five period of Gastrodia elata3.740
SRR5643664five period of Gastrodia elata0.360
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.660
SRR6049655Rhizomagastrodiae_C368-T10_good_10.930
SRR6049656Rhizomagastrodiae_C368-T07_good_10.160
SRR6049657Rhizomagastrodiae_C368-T07_good_10.320
SRR6049658Rhizomagastrodiae_C368-T04_good_10.090
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.080
SRR6049661Rhizomagastrodiae_C368-T04_good_10.250
SRR6049662Rhizomagastrodiae_C368-T01_good_10.410
SRR6049663Rhizomagastrodiae_C368-T01_good_10.180
SRR6049664Rhizomagastrodiae_C368-T10_good_10.210
SRR6049665Rhizomagastrodiae_C368-T10_good_10.210
SRP279888GastroGastrodia elata tuber 0.21
JuvenJuvenile tuber0.00
Mother_GastroMother tuber of Gastrodia elata 1.06
Mother_JuvenMother tuber of Juvenile 0.77