Detail information of GWHGAAEX008646/evm.TU.scaffold_227.18


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|83309400|ref|YP_419664.1|2.00E-44NTP pyrophosphohydrolase including oxidative damage repair enzyme [Magnetospirillum magneticum AMB-1]
nrgi|672178215|ref|XP_008809233.1|1.85E-96PREDICTED: nudix hydrolase 26, chloroplastic-like isoform X1 [Phoenix dactylifera]
Swissprottr|Q9CAF2|NUD26_ARATH3.00E-85Nudix hydrolase 26, chloroplastic (Precursor)
trEMBLtr|O04841|O04841_LUPAN4.00E-90Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase {ECO:0000313|EMBL:AAC49902.1}
TAIRAT3G106201.00E-84nudix hydrolase homolog 26

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000241297387326947-
Transcript Sequence

Network for GWHGAAEX008646

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00293.27NUDIX511945.50E-28
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016787Molecular Functionhydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.920
SRR2545915Juvenile tuber18.170
SRP108465SRR5643513five period of Gastrodia elata20.970
SRR5643514five period of Gastrodia elata25.940
SRR5643515five period of Gastrodia elata21.450
SRR5643524five period of Gastrodia elata26.510
SRR5643525five period of Gastrodia elata30.690
SRR5643528five period of Gastrodia elata23.790
SRR5643658five period of Gastrodia elata31.140
SRR5643659five period of Gastrodia elata16.290
SRR5643660five period of Gastrodia elata16.230
SRR5643661five period of Gastrodia elata10.370
SRR5643662five period of Gastrodia elata13.920
SRR5643663five period of Gastrodia elata14.750
SRR5643664five period of Gastrodia elata13.040
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.110
SRR6049655Rhizomagastrodiae_C368-T10_good_15.050
SRR6049656Rhizomagastrodiae_C368-T07_good_111.680
SRR6049657Rhizomagastrodiae_C368-T07_good_113.300
SRR6049658Rhizomagastrodiae_C368-T04_good_17.550
SRR6049659Rhizomagastrodiae_C368-T04_good_19.200
SRR6049660Rhizomagastrodiae_C368-T01_good_110.750
SRR6049661Rhizomagastrodiae_C368-T04_good_18.110
SRR6049662Rhizomagastrodiae_C368-T01_good_111.830
SRR6049663Rhizomagastrodiae_C368-T01_good_110.640
SRR6049664Rhizomagastrodiae_C368-T10_good_120.240
SRR6049665Rhizomagastrodiae_C368-T10_good_120.240
SRP279888GastroGastrodia elata tuber 17.25
JuvenJuvenile tuber19.29
Mother_GastroMother tuber of Gastrodia elata 14.42
Mother_JuvenMother tuber of Juvenile 16.53