Detail information of GWHGAAEX008647/evm.TU.scaffold_227.19
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|383761641|ref|YP_005440623.1| | 3.00E-71 | guanylate kinase [Caldilinea aerophila DSM 14535 = NBRC 104270] |
| KOG | KOG0707 | 2.00E-107 | Guanylate kinase |
| nr | gi|672158772|ref|XP_008799130.1| | 6.54E-136 | PREDICTED: guanylate kinase [Phoenix dactylifera] |
| Swissprot | tr|Q10M74|GMK2_ORYSJ | 2.00E-125 | Guanylate kinase 2, chloroplastic/mitochondrial (Precursor) |
| trEMBL | tr|M0T5A5|M0T5A5_MUSAM | 6.00E-127 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P08560_001} |
| TAIR | AT3G06200 | 2.00E-107 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000241 | 336330 | 338542 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX008647
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module13 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00625.20 | Guanylate_kin | 103 | 283 | 2.80E-38 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00942 | E2.7.4.8, gmk | Metabolic pathways | map01100 |
| Purine metabolism | map00230 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006163 | Biological Process | purine nucleotide metabolic process |
| GO:0004385 | Molecular Function | guanylate kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 19.130 |
| SRR2545915 | Juvenile tuber | 15.210 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 11.780 |
| SRR5643514 | five period of Gastrodia elata | 10.970 | |
| SRR5643515 | five period of Gastrodia elata | 15.580 | |
| SRR5643524 | five period of Gastrodia elata | 11.700 | |
| SRR5643525 | five period of Gastrodia elata | 27.530 | |
| SRR5643528 | five period of Gastrodia elata | 46.950 | |
| SRR5643658 | five period of Gastrodia elata | 17.890 | |
| SRR5643659 | five period of Gastrodia elata | 55.940 | |
| SRR5643660 | five period of Gastrodia elata | 38.030 | |
| SRR5643661 | five period of Gastrodia elata | 52.620 | |
| SRR5643662 | five period of Gastrodia elata | 53.160 | |
| SRR5643663 | five period of Gastrodia elata | 38.110 | |
| SRR5643664 | five period of Gastrodia elata | 130.300 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 23.010 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 10.160 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 21.160 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 21.060 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 22.350 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 18.140 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 24.570 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 16.820 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 18.680 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 18.830 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 16.510 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 16.510 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 27.09 |
| Juven | Juvenile tuber | 9.29 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 25.54 | |
| Mother_Juven | Mother tuber of Juvenile | 7.97 |