Detail information of GWHGAAEX008649/evm.TU.scaffold_227.22


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG26671.00E-172COPII vesicle protein
nrgi|672168653|ref|XP_008804334.1|0PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X1 [Phoenix dactylifera]
Swissprottr|Q9T042|PDI54_ARATH2.00E-21Protein disulfide-isomerase 5-4 (Precursor)
trEMBLtr|M0RE66|M0RE66_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P00390_001}
TAIRAT1G360501.00E-172Endoplasmic reticulum vesicle transporter protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000241358983385582+
Transcript Sequence

Network for GWHGAAEX008649

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13850.5ERGIC_N7961.40E-30
PF07970.11COPIIcoated_ERV1483641.80E-77
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms70.410
SRR2545915Juvenile tuber58.300
SRP108465SRR5643513five period of Gastrodia elata33.330
SRR5643514five period of Gastrodia elata33.090
SRR5643515five period of Gastrodia elata32.610
SRR5643524five period of Gastrodia elata32.280
SRR5643525five period of Gastrodia elata25.840
SRR5643528five period of Gastrodia elata17.590
SRR5643658five period of Gastrodia elata17.510
SRR5643659five period of Gastrodia elata40.430
SRR5643660five period of Gastrodia elata39.190
SRR5643661five period of Gastrodia elata37.240
SRR5643662five period of Gastrodia elata31.220
SRR5643663five period of Gastrodia elata33.280
SRR5643664five period of Gastrodia elata30.350
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_136.240
SRR6049655Rhizomagastrodiae_C368-T10_good_131.030
SRR6049656Rhizomagastrodiae_C368-T07_good_140.470
SRR6049657Rhizomagastrodiae_C368-T07_good_134.550
SRR6049658Rhizomagastrodiae_C368-T04_good_139.650
SRR6049659Rhizomagastrodiae_C368-T04_good_141.620
SRR6049660Rhizomagastrodiae_C368-T01_good_136.360
SRR6049661Rhizomagastrodiae_C368-T04_good_137.030
SRR6049662Rhizomagastrodiae_C368-T01_good_143.580
SRR6049663Rhizomagastrodiae_C368-T01_good_140.950
SRR6049664Rhizomagastrodiae_C368-T10_good_149.040
SRR6049665Rhizomagastrodiae_C368-T10_good_149.040
SRP279888GastroGastrodia elata tuber 35.09
JuvenJuvenile tuber22.64
Mother_GastroMother tuber of Gastrodia elata 31.76
Mother_JuvenMother tuber of Juvenile 19.92