Detail information of GWHGAAEX008650/evm.TU.scaffold_227.23
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|71907234|ref|YP_284821.1| | 4.00E-17 | protein kinase:GAF [Dechloromonas aromatica RCB] |
| KOG | KOG1187 | 1.00E-48 | Serine/threonine protein kinase |
| nr | gi|695009950|ref|XP_009391628.1| | 2.88E-72 | PREDICTED: serine/threonine-protein kinase-like protein At5g23170 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q9SV05|CCR35_ARATH | 3.00E-49 | Serine/threonine-protein kinase-like protein At3g51990 (Precursor) |
| trEMBL | tr|A0A068TMW7|A0A068TMW7_COFCA | 1.00E-62 | Coffea canephora |
| TAIR | AT3G51990 | 1.00E-48 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000241 | 388412 | 389539 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX008650
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 18 | 207 | 4.30E-31 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_CR4L |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.370 |
| SRR2545915 | Juvenile tuber | 0.170 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 5.950 |
| SRR5643514 | five period of Gastrodia elata | 6.420 | |
| SRR5643515 | five period of Gastrodia elata | 2.020 | |
| SRR5643524 | five period of Gastrodia elata | 4.670 | |
| SRR5643525 | five period of Gastrodia elata | 3.640 | |
| SRR5643528 | five period of Gastrodia elata | 6.090 | |
| SRR5643658 | five period of Gastrodia elata | 2.350 | |
| SRR5643659 | five period of Gastrodia elata | 1.330 | |
| SRR5643660 | five period of Gastrodia elata | 0.620 | |
| SRR5643661 | five period of Gastrodia elata | 1.190 | |
| SRR5643662 | five period of Gastrodia elata | 0.970 | |
| SRR5643663 | five period of Gastrodia elata | 1.320 | |
| SRR5643664 | five period of Gastrodia elata | 1.340 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 2.450 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 3.830 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 4.000 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 2.730 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 2.240 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 1.940 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 2.240 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 2.760 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 4.510 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 3.080 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 8.530 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 8.530 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 4.45 |
| Juven | Juvenile tuber | 2.40 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 7.14 | |
| Mother_Juven | Mother tuber of Juvenile | 4.88 |