Detail information of GWHGAAEX008689/evm.TU.scaffold_228.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|124267817|ref|YP_001021821.1|7.00E-06farnesyl-diphosphate synthase [Methylibium petroleiphilum PM1]
KOGKOG07761.00E-07Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase
nrgi|157779735|gb|ABV71395.1|4.63E-36geranyl diphosphate synthase [Phalaenopsis bellina]
Swissprottr|Q39108|GGR_ARATH3.00E-08Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic (Precursor)
trEMBLtr|B5KLA8|B5KLA8_9ASPA2.00E-36Geranyl diphosphate synthase {ECO:0000313|EMBL:ABV71395.1}
TAIRAT4G384601.00E-07geranylgeranyl reductase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000023378628767-
Transcript Sequence

Network for GWHGAAEX008689

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.960
SRR2545915Juvenile tuber0.110
SRP108465SRR5643513five period of Gastrodia elata44.660
SRR5643514five period of Gastrodia elata24.130
SRR5643515five period of Gastrodia elata12.020
SRR5643524five period of Gastrodia elata13.000
SRR5643525five period of Gastrodia elata0.310
SRR5643528five period of Gastrodia elata3.630
SRR5643658five period of Gastrodia elata0.620
SRR5643659five period of Gastrodia elata2.590
SRR5643660five period of Gastrodia elata0.820
SRR5643661five period of Gastrodia elata0.190
SRR5643662five period of Gastrodia elata1.740
SRR5643663five period of Gastrodia elata0.350
SRR5643664five period of Gastrodia elata0.510
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.100
SRR6049655Rhizomagastrodiae_C368-T10_good_1103.740
SRR6049656Rhizomagastrodiae_C368-T07_good_125.060
SRR6049657Rhizomagastrodiae_C368-T07_good_119.900
SRR6049658Rhizomagastrodiae_C368-T04_good_15.880
SRR6049659Rhizomagastrodiae_C368-T04_good_19.130
SRR6049660Rhizomagastrodiae_C368-T01_good_111.980
SRR6049661Rhizomagastrodiae_C368-T04_good_16.880
SRR6049662Rhizomagastrodiae_C368-T01_good_112.050
SRR6049663Rhizomagastrodiae_C368-T01_good_14.940
SRR6049664Rhizomagastrodiae_C368-T10_good_184.730
SRR6049665Rhizomagastrodiae_C368-T10_good_184.730
SRP279888GastroGastrodia elata tuber 0.91
JuvenJuvenile tuber68.73
Mother_GastroMother tuber of Gastrodia elata 3.28
Mother_JuvenMother tuber of Juvenile 12.94