Detail information of GWHGAAEX008699/evm.TU.scaffold_228.13


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|719964068|ref|XP_010251568.1|5.33E-66PREDICTED: uncharacterized protein LOC104593432 [Nelumbo nucifera]
trEMBLtr|M0STF2|M0STF2_MUSAM2.00E-64Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P30400_001}
TAIRAT4G241303.00E-61Protein of unknown function, DUF538

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000233272624273459+
Transcript Sequence

Network for GWHGAAEX008699

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04398.11DUF538431543.10E-28
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms68.880
SRR2545915Juvenile tuber117.130
SRP108465SRR5643513five period of Gastrodia elata261.690
SRR5643514five period of Gastrodia elata847.060
SRR5643515five period of Gastrodia elata346.150
SRR5643524five period of Gastrodia elata687.810
SRR5643525five period of Gastrodia elata228.220
SRR5643528five period of Gastrodia elata24.840
SRR5643658five period of Gastrodia elata78.460
SRR5643659five period of Gastrodia elata8.450
SRR5643660five period of Gastrodia elata24.080
SRR5643661five period of Gastrodia elata7.020
SRR5643662five period of Gastrodia elata4.190
SRR5643663five period of Gastrodia elata1.630
SRR5643664five period of Gastrodia elata5.570
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1112.280
SRR6049655Rhizomagastrodiae_C368-T10_good_1256.150
SRR6049656Rhizomagastrodiae_C368-T07_good_1221.320
SRR6049657Rhizomagastrodiae_C368-T07_good_1105.490
SRR6049658Rhizomagastrodiae_C368-T04_good_173.940
SRR6049659Rhizomagastrodiae_C368-T04_good_194.060
SRR6049660Rhizomagastrodiae_C368-T01_good_1116.260
SRR6049661Rhizomagastrodiae_C368-T04_good_1112.010
SRR6049662Rhizomagastrodiae_C368-T01_good_1261.910
SRR6049663Rhizomagastrodiae_C368-T01_good_1150.070
SRR6049664Rhizomagastrodiae_C368-T10_good_1156.440
SRR6049665Rhizomagastrodiae_C368-T10_good_1156.440
SRP279888GastroGastrodia elata tuber 3.94
JuvenJuvenile tuber4.07
Mother_GastroMother tuber of Gastrodia elata 494.19
Mother_JuvenMother tuber of Juvenile 342.90