Gene detail

Detail information of GWHGAAEX008703/evm.TU.scaffold_228.18

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|296100314\|ref\|YP_003620483.1\|	1.00E-06	hypothetical protein LKI_10676 [Leuconostoc kimchii IMSNU 11154]
nr	gi\|719963822\|ref\|XP_010250809.1\|	1.38E-89	PREDICTED: membrane protein of ER body-like protein isoform X3 [Nelumbo nucifera]
Swissprot	tr\|Q8W4P8\|MEB1_ARATH	6.00E-45	Membrane protein of ER body 1
trEMBL	tr\|A0A067JSZ7\|A0A067JSZ7_JATCU	4.00E-82	Uncharacterized protein {ECO:0000313\|EMBL:KDP23115.1}
TAIR	AT4G27860	3.00E-44	vacuolar iron transporter (VIT) family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000233	706220	732872	+

Transcript Sequence
>GWHTAAEX008703 CTTATCCCCTTTCATACATAGATGCTAACGGAGGGCGGCGGTGAGATTGAGACGGTAATGGAGAAGACATGGGCGGATGAGGAGGAGGTTTCCGGCGAGGTCGAAGGCGGAGGCGGTCTTGATACCAAGCGCCGGAGGAAGCTCAGCTTCAGCAATGACGCTCCTCTGCCTGTCGGAGAAGACAATGACCCTCCTCTGCCTGTCGGAGAAGACCAAGAAGATGCTAAATATTTTAGTCCCGATAATACCTCATCGAGATCAACTGAAGCAGAGATTTTTGTTGCTGAGAAAAATTTTGAATACGGGAATTCTGTATTCACGGACATATTGGATGATCTTCACTGTGCTCCAAATGCAAGAGAAAAACATGATCATAGTCACATTAAAGCTCTAAGTGAACCAAATTTACATATTCCTGCTGTAGATGATGTTGCGAATGCATTTGTAGAAGCTACTCAGCCTGAAACTCCAAGCCATATACATAATTCGGCTGCAAATCTGTATAAATTAGATGTTGCAGAGCTGGACCTTGAGAAGGTGATAGAGGAACAAGAAACTCATGATTTGTTCTGTCCACATTGCCATTCATGCATCACAAAAAGAGTAATTTTACGGAAAAGGAAAAGGAAAGCTCAAGATTTTCAGCATGAAGAACGCCCAGAGAAGCTGCATGTTAAATCTAATATTGCAGCTGCTACTTTTGATGAAATTGGAGAAACAAGCGGTGATAATGAGCCCAATGTATTTCGATGTTTATCATGCTTAAGCTTTTTCATTCCAACAGATAACGGATTTAATATATTCCAAATCTTTAGAAAAAGGGAGGAATGTGTGAGCACACAAGTTCTCACCGATCAATCTTCAGGACAGGCTTCTTCAAGAGATGGAACTTGGTTATCTCTCTTTTTCAAACCAGATTCATCCACAAAAAAGGGAACTGTATTGCCAGTACATCCTGATCTTGGATATCCTGGACAAAGCATCCAAGCTTCTCCAGCTCTTACTTTATCTAAAACTTCAGACTACACAGATGGTGAGAAATCAAAAAATGACGCTCAATTGCCACAGCTTGAGATCTCATTTGGTGGGGATCAGCCTGAAGAAAATCAAAGCATTACTGCTTTACATATACCTGTACCTGTTGAAGTTCAAGCAAGTTATGCAAGCGATGGAATGATCACTCAATTACCGGTTGACCTTCAGGCCTCATTTGGCGGGAGTCGAATACTAAATGATAGTAAGAGTGCTCAAGATATACCTGTTTCTGATGTTTCCAAAAGTGGAGCAAGCTATTCAACCAAGTTAAAGATCAGTTCAGATGACATCACTCCGGTGTTCATAAACAAGACTGAAATATCAAGTGAAATTGACCAAAGTAGTCATGATGCTGGAGTAATGCCACCTGTTGCTGTTTTTTTATCCCATGAAGCGGATGTGATTAAGCCTGTCGGAATGGTTGAACCTTCTTCATCACAAGGAGCTTCTCAAAAGGACTTGAACGGTAGTATTTCTTCTTCACTGCCGACCATTGTTCTGCCTCAGGGTGATGTGCAGATTAATGTGGGCGATCAGATATTACTGGGACCAAGAAGAGAAAGTGAATGGGAACTTCTAAAGAGTATCGTCTATGGGGGTTTGACTGAATCAATTACCAGTCTTGGTGTAGTATCTTCAGCCGCTGGTGCTGATACTTCAACATTGAATGTTGTCGCCCTCGGATTGGCAAATCTTATAGGTGGCTTCTTTGTGATTATAAATGATCTTTCAGAACTCAAAAGCAGTGCAGCTGCTGCAATCGAAAAGGACGAACGGACAGGCCGCTATTGGAAGCTGCTAGGCAGAAAATCCAACTTCGGCTTGCATGCAACCATCACTGTAATTTCGTACATCTTCTTTGGGCTGCTGCCACCTGTCATCTATGGCTTTTCCTTTAGGCAGAGTGACCAAAAGGAGTACAAGCTCATTGCTGTTGCTTCGTCCTTGCTCTTGTGCATTGCTCTTCTCGCTATCGGAAAGGCTCATGTGAGCGAGCCCAAGTCTTATATCAAAACTTTTCTTTATTATCTCTGCTTAGCATTCACAGCTTCTGGCCTTTCCTATGTCACCGGGGTGTTGATTGATAGATTTCTTCAGCAGTTGGGTTTGTTTGAACACAAAGCCCCTATGCCGTCTCCTCCGCCGCCGTCGCCTTTCAACAGCCTATTGGGCTTAAACTCTAGTATGCCTTTTCGGGCAACTATTTGAGCAAAAGGATGATGTTAATGCCTAGCTCATTTCCTTAGTTCACTTTGAGGATTGCTTTGTTTCTAATTCATAGCTCAAGAAAGTACACATAGCTGTTGGATGCTTGACACGTGGAAATTGCTACACGTCATGCATCCAACATGTGAAAGCTGCAATGGTTCTTAATTCATATGCTCGTTTTAGACAGTTCTCAAAATGTATCATCTTACTCTTGCTCTAATTTAAAAAGAGCATTGGAAATTTCATCATGGTTGTTTGATCGGGGTGGGGTTCCTCTTTTGATGCCCTTTTGATTCTACATAACTCTAGGATTTAATAGTATGTGCAGAGCACTGAGTTGTTCTTATTATTCGCATATCTCAGTTCGAGCCTGAGAATCATTCTCTATACTGCTTATGGTATCTGTCTAATGGTTCATATCGTCAATCTGTTATATACTGTTCATGTTATCTAGAAGGGAAGGCATTGTCACGTGCCCACCCACATGCAGCCAGCTGTCGTCATGTTGCAAAGCTACTGTGATTCGATGACTTTTGAAATAGAGTCTAAGTTTTGTGGGACCCCCTTTGAAAGTGAATCCCGATCTGAATGATATTGTGGCGCAGTAATTGATACTCAAAATTTATTATCCTGTCAAAGGTTTCGATCTCCGCCAAACATACGAATCTATCTTCTTAAAAAAATCATAAACTAAAGTCATGAACCGAAGACCTTTGGTCGGAGCCTTATAGCTGAAAACAATCACATTACGAGACTGAAAGGGCTAGGATGGACTTTTTTATGTATTATTAAATGTAAGAATAAACTAAGTGCCAAGGCGCGCCTAGTGCTTGTTGGGAGACTGGCGTCACAGCGTGCCGCAGCGCACGGGTGTTCGGCGCATGCCTATAAATTCATTGTAAGCTTCTTTCAGGGTGAGCTTTCCAGGATTTTTTGGGGGTGTATAGAAATTGTTTCAAAGATGAGACTAAAGCTCTTAAGATTTGGGCAAGAATTATTAAACTCTAGGAATATTTTAATCTCATCTTCAATAGTAAAATATTCCATGCTTTAGTATTTGTGGATGTAAGTGCTAGCACCGAATAATATAAATTTCTTGTCCTGTGGT

Network for GWHGAAEX008703

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	2.530
SRP064423	SRR2545915	Juvenile tuber	3.340
SRP108465	SRR5643513	five period of Gastrodia elata	15.770
	SRR5643514	five period of Gastrodia elata	6.930
	SRR5643515	five period of Gastrodia elata	7.550
	SRR5643524	five period of Gastrodia elata	8.940
	SRR5643525	five period of Gastrodia elata	0.210
	SRR5643528	five period of Gastrodia elata	0.140
	SRR5643658	five period of Gastrodia elata	0.190
	SRR5643659	five period of Gastrodia elata	1.190
	SRR5643660	five period of Gastrodia elata	0.760
	SRR5643661	five period of Gastrodia elata	0.810
	SRR5643662	five period of Gastrodia elata	0.690
	SRR5643663	five period of Gastrodia elata	0.810
	SRR5643664	five period of Gastrodia elata	0.090
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	3.840
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	6.750
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.520
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.680
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.170
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	2.400
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	5.990
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	10.310
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.940
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.490
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	6.880
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	6.880
SRP279888	Gastro	Gastrodia elata tuber	1.39
	Juven	Juvenile tuber	2.15
	Mother_Gastro	Mother tuber of Gastrodia elata	0.43
	Mother_Juven	Mother tuber of Juvenile	8.44