Detail information of GWHGAAEX008704/evm.TU.scaffold_228.19


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|289450785|ref|YP_003475433.1|6.00E-23putative serine/threonine-protein kinase PrkC [Clostridiales genomosp. BVAB3 str. UPII9-5]
KOGKOG11872.00E-64Serine/threonine protein kinase
nrgi|743854828|ref|XP_010941089.1|7.40E-81PREDICTED: probable receptor-like protein kinase At1g33260 [Elaeis guineensis]
Swissprottr|B3LFC0|Y1332_ARATH1.00E-65Probable receptor-like protein kinase At1g33260
trEMBLtr|M0SSH3|M0SSH3_MUSAM1.00E-77Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P27110_001}
TAIRAT4G103902.00E-64Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000233732894734554-
Transcript Sequence

Network for GWHGAAEX008704

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.16Pkinase_Tyr683151.60E-31
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_RLCK-XIII

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.040
SRR2545915Juvenile tuber7.840
SRP108465SRR5643513five period of Gastrodia elata8.270
SRR5643514five period of Gastrodia elata5.890
SRR5643515five period of Gastrodia elata11.800
SRR5643524five period of Gastrodia elata6.060
SRR5643525five period of Gastrodia elata133.190
SRR5643528five period of Gastrodia elata99.980
SRR5643658five period of Gastrodia elata161.270
SRR5643659five period of Gastrodia elata5.580
SRR5643660five period of Gastrodia elata5.550
SRR5643661five period of Gastrodia elata5.340
SRR5643662five period of Gastrodia elata6.670
SRR5643663five period of Gastrodia elata6.170
SRR5643664five period of Gastrodia elata12.270
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.760
SRR6049655Rhizomagastrodiae_C368-T10_good_111.760
SRR6049656Rhizomagastrodiae_C368-T07_good_114.960
SRR6049657Rhizomagastrodiae_C368-T07_good_19.150
SRR6049658Rhizomagastrodiae_C368-T04_good_113.740
SRR6049659Rhizomagastrodiae_C368-T04_good_117.550
SRR6049660Rhizomagastrodiae_C368-T01_good_125.160
SRR6049661Rhizomagastrodiae_C368-T04_good_116.020
SRR6049662Rhizomagastrodiae_C368-T01_good_117.150
SRR6049663Rhizomagastrodiae_C368-T01_good_128.970
SRR6049664Rhizomagastrodiae_C368-T10_good_113.120
SRR6049665Rhizomagastrodiae_C368-T10_good_113.120
SRP279888GastroGastrodia elata tuber 7.82
JuvenJuvenile tuber2.61
Mother_GastroMother tuber of Gastrodia elata 166.25
Mother_JuvenMother tuber of Juvenile 48.68