Detail information of GWHGAAEX008710/evm.TU.scaffold_228.26


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG32083.00E-91SNARE protein GS28
nrgi|729354680|ref|XP_010544626.1|2.03E-90PREDICTED: Golgi SNAP receptor complex member 1-2-like isoform X1 [Tarenaya hassleriana]
Swissprottr|O22151|GOS12_ARATH7.00E-90Golgi SNAP receptor complex member 1-2
trEMBLtr|A0A061E1Z0|A0A061E1Z0_THECC2.00E-89Golgi SNAP receptor complex member 1 {ECO:0000256|PIRNR:PIRNR027109}
TAIRAT2G452003.00E-91golgi snare 12

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000233889876904239+
Transcript Sequence

Network for GWHGAAEX008710

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K08495GOSR1, GOS1 SNARE interactions in vesicular transport map04130

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms23.240
SRR2545915Juvenile tuber20.240
SRP108465SRR5643513five period of Gastrodia elata31.860
SRR5643514five period of Gastrodia elata30.520
SRR5643515five period of Gastrodia elata31.070
SRR5643524five period of Gastrodia elata25.940
SRR5643525five period of Gastrodia elata47.120
SRR5643528five period of Gastrodia elata42.900
SRR5643658five period of Gastrodia elata44.310
SRR5643659five period of Gastrodia elata28.930
SRR5643660five period of Gastrodia elata27.850
SRR5643661five period of Gastrodia elata27.340
SRR5643662five period of Gastrodia elata31.410
SRR5643663five period of Gastrodia elata30.570
SRR5643664five period of Gastrodia elata27.390
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.920
SRR6049655Rhizomagastrodiae_C368-T10_good_125.650
SRR6049656Rhizomagastrodiae_C368-T07_good_124.870
SRR6049657Rhizomagastrodiae_C368-T07_good_118.170
SRR6049658Rhizomagastrodiae_C368-T04_good_119.650
SRR6049659Rhizomagastrodiae_C368-T04_good_117.660
SRR6049660Rhizomagastrodiae_C368-T01_good_116.740
SRR6049661Rhizomagastrodiae_C368-T04_good_119.590
SRR6049662Rhizomagastrodiae_C368-T01_good_120.920
SRR6049663Rhizomagastrodiae_C368-T01_good_119.390
SRR6049664Rhizomagastrodiae_C368-T10_good_124.930
SRR6049665Rhizomagastrodiae_C368-T10_good_124.930
SRP279888GastroGastrodia elata tuber 33.87
JuvenJuvenile tuber28.91
Mother_GastroMother tuber of Gastrodia elata 40.03
Mother_JuvenMother tuber of Juvenile 32.14