Detail information of GWHGAAEX008717/evm.TU.scaffold_229.7


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG41761.00E-124Uncharacterized conserved protein
nrgi|695074080|ref|XP_009384228.1|6.36E-150PREDICTED: RNA demethylase ALKBH5-like [Musa acuminata subsp. malaccensis]
trEMBLtr|M0RTG1|M0RTG1_MUSAM1.00E-149Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P18810_001}
TAIRAT2G179701.00E-1242-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000225331434351697+
Transcript Sequence

Network for GWHGAAEX008717

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13532.52OG-FeII_Oxy_2812762.60E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms80.460
SRR2545915Juvenile tuber87.830
SRP108465SRR5643513five period of Gastrodia elata75.450
SRR5643514five period of Gastrodia elata68.080
SRR5643515five period of Gastrodia elata101.170
SRR5643524five period of Gastrodia elata74.800
SRR5643525five period of Gastrodia elata104.430
SRR5643528five period of Gastrodia elata98.600
SRR5643658five period of Gastrodia elata91.000
SRR5643659five period of Gastrodia elata104.740
SRR5643660five period of Gastrodia elata106.460
SRR5643661five period of Gastrodia elata114.000
SRR5643662five period of Gastrodia elata115.340
SRR5643663five period of Gastrodia elata116.070
SRR5643664five period of Gastrodia elata92.930
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_168.800
SRR6049655Rhizomagastrodiae_C368-T10_good_186.610
SRR6049656Rhizomagastrodiae_C368-T07_good_169.670
SRR6049657Rhizomagastrodiae_C368-T07_good_166.270
SRR6049658Rhizomagastrodiae_C368-T04_good_171.590
SRR6049659Rhizomagastrodiae_C368-T04_good_169.770
SRR6049660Rhizomagastrodiae_C368-T01_good_176.230
SRR6049661Rhizomagastrodiae_C368-T04_good_165.410
SRR6049662Rhizomagastrodiae_C368-T01_good_173.080
SRR6049663Rhizomagastrodiae_C368-T01_good_175.520
SRR6049664Rhizomagastrodiae_C368-T10_good_179.640
SRR6049665Rhizomagastrodiae_C368-T10_good_179.640
SRP279888GastroGastrodia elata tuber 92.20
JuvenJuvenile tuber67.82
Mother_GastroMother tuber of Gastrodia elata 82.04
Mother_JuvenMother tuber of Juvenile 100.64