Detail information of GWHGAAEX008727/evm.TU.scaffold_23.9


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17219.00E-69FOG: Zn-finger
nrgi|672134459|ref|XP_008790878.1|2.64E-121PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like [Phoenix dactylifera]
Swissprottr|Q9C8N5|STOP1_ARATH3.00E-69Protein SENSITIVE TO PROTON RHIZOTOXICITY 1
trEMBLtr|B9HFF7|B9HFF7_POPTR9.00E-112Uncharacterized protein {ECO:0000313|EMBL:EEE91009.1}
TAIRAT1G343709.00E-69C2H2 and C2HC zinc fingers superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000025182608184088-
Transcript Sequence

Network for GWHGAAEX008727

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12874.6zf-met1571760.052
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.940
SRR2545915Juvenile tuber13.940
SRP108465SRR5643513five period of Gastrodia elata28.370
SRR5643514five period of Gastrodia elata25.520
SRR5643515five period of Gastrodia elata51.600
SRR5643524five period of Gastrodia elata31.360
SRR5643525five period of Gastrodia elata26.130
SRR5643528five period of Gastrodia elata82.880
SRR5643658five period of Gastrodia elata40.040
SRR5643659five period of Gastrodia elata29.930
SRR5643660five period of Gastrodia elata20.660
SRR5643661five period of Gastrodia elata32.640
SRR5643662five period of Gastrodia elata30.350
SRR5643663five period of Gastrodia elata21.350
SRR5643664five period of Gastrodia elata15.090
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.560
SRR6049655Rhizomagastrodiae_C368-T10_good_111.210
SRR6049656Rhizomagastrodiae_C368-T07_good_110.480
SRR6049657Rhizomagastrodiae_C368-T07_good_110.340
SRR6049658Rhizomagastrodiae_C368-T04_good_19.530
SRR6049659Rhizomagastrodiae_C368-T04_good_18.590
SRR6049660Rhizomagastrodiae_C368-T01_good_120.210
SRR6049661Rhizomagastrodiae_C368-T04_good_18.750
SRR6049662Rhizomagastrodiae_C368-T01_good_130.480
SRR6049663Rhizomagastrodiae_C368-T01_good_132.030
SRR6049664Rhizomagastrodiae_C368-T10_good_114.250
SRR6049665Rhizomagastrodiae_C368-T10_good_114.250
SRP279888GastroGastrodia elata tuber 17.44
JuvenJuvenile tuber12.44
Mother_GastroMother tuber of Gastrodia elata 48.94
Mother_JuvenMother tuber of Juvenile 48.62