Detail information of GWHGAAEX008733/evm.TU.scaffold_23.15


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG27121.00E-32Transcriptional coactivator
nrgi|743816633|ref|XP_010930695.1|8.91E-43PREDICTED: RNA polymerase II transcriptional coactivator KIWI-like [Elaeis guineensis]
Swissprottr|O65154|KIWI_ARATH3.00E-33RNA polymerase II transcriptional coactivator KIWI
trEMBLtr|A0A067KC90|A0A067KC90_JATCU3.00E-39Uncharacterized protein {ECO:0000313|EMBL:KDP29464.1}
TAIRAT5G092501.00E-32ssDNA-binding transcriptional regulator

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000025466204487587+
Transcript Sequence

Network for GWHGAAEX008733

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02229.15PC438881.90E-26
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyCoactivator p15

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms37.090
SRR2545915Juvenile tuber41.760
SRP108465SRR5643513five period of Gastrodia elata72.680
SRR5643514five period of Gastrodia elata91.600
SRR5643515five period of Gastrodia elata78.200
SRR5643524five period of Gastrodia elata91.710
SRR5643525five period of Gastrodia elata83.010
SRR5643528five period of Gastrodia elata69.670
SRR5643658five period of Gastrodia elata61.850
SRR5643659five period of Gastrodia elata76.020
SRR5643660five period of Gastrodia elata67.670
SRR5643661five period of Gastrodia elata70.850
SRR5643662five period of Gastrodia elata42.110
SRR5643663five period of Gastrodia elata60.260
SRR5643664five period of Gastrodia elata51.100
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_134.790
SRR6049655Rhizomagastrodiae_C368-T10_good_115.400
SRR6049656Rhizomagastrodiae_C368-T07_good_136.390
SRR6049657Rhizomagastrodiae_C368-T07_good_128.630
SRR6049658Rhizomagastrodiae_C368-T04_good_126.470
SRR6049659Rhizomagastrodiae_C368-T04_good_119.970
SRR6049660Rhizomagastrodiae_C368-T01_good_129.300
SRR6049661Rhizomagastrodiae_C368-T04_good_125.140
SRR6049662Rhizomagastrodiae_C368-T01_good_143.000
SRR6049663Rhizomagastrodiae_C368-T01_good_139.370
SRR6049664Rhizomagastrodiae_C368-T10_good_146.520
SRR6049665Rhizomagastrodiae_C368-T10_good_146.520
SRP279888GastroGastrodia elata tuber 50.68
JuvenJuvenile tuber66.88
Mother_GastroMother tuber of Gastrodia elata 35.01
Mother_JuvenMother tuber of Juvenile 50.22