Gene detail

Detail information of GWHGAAEX008743/evm.TU.scaffold_23.25

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|18976969\|ref\|NP_578326.1\|	9.00E-107	IAA-amino acid hydrolase [Pyrococcus furiosus DSM 3638]
nr	gi\|743870634\|ref\|XP_010906094.1\|	0	PREDICTED: IAA-amino acid hydrolase ILR1-like 6 [Elaeis guineensis]
Swissprot	tr\|Q5Z678\|ILL6_ORYSJ	0	IAA-amino acid hydrolase ILR1-like 6 (Precursor)
trEMBL	tr\|M0SCJ1\|M0SCJ1_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P07240_001}
TAIR	AT1G44350	2.00E-180	IAA-leucine resistant (ILR)-like gene 6

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000025	707603	732051	-

Transcript Sequence
>GWHTAAEX008743 ATACAACCTTAACTACTTAGCCAACATCTTCATTTTCTCAATTTTAAGTGAGAGATGGGAAATATAAAAATATATATGTATTATTATTTGATAATAGTGTATTTGTGTTCGTCTCTTTGCATAGAATCGATATGTTTTCGTCTTCAAGATCCGAACAAATTGAAGAGCTTTGTCTCCTCGAGATCCGAAGTCACGAGCTTACTCTTTGATCGGTTTGAGCGAACGAACTAACAAGAAGAAGCCTTGAACGAATGAGAATCGATCCGATCAACCTTCGACTCCATTCGTTTGCATAAGACCGAAGTGTCGAGCATCAATCTTTAAGATCAAAGTGATATTTGTGGTATCTGTTCATGATGAAAGTTGAAAGAAGTAAGCTAAACAGTCAACTGGGATCTAAAATAGCATTATAATCTATATCCGTGAAAAAAATTAAAATTTTGGATAAAATTTGAAGTCTCTTAGTTTAAAATTTCATGCTAAAGAGCACCAGAATTAAATTGAAACTCAGCATAAAGAATATTTTTTATATAAAATTTGAACTCGTGCAGCAGAATAATCTTACGAGTTAAATGCAGCGGTGAAGTCCTGTGAGTCTGAGACGCTCCGGCGACCTCATTGCCGGTAGCGCGCCGCCGATTGTGACCATTCAGCCAGCGCTGTTACCCCCGCTTCGATGCCCTGCAATTTGACCAGGACTTTGTTCTTACTACTGCCCTTTCTTCTTTCGCCGAGGACGGGCGCTGGAGGATTGGATGTCGACGAGATTCTCTTCGGAGGGATTTTTGAGGTTTCCGGAAGTGGATCCCCTCTAGCGAGACGCGCGGGTCAGGAAAACAGGAGCAGGAGTTCGCCTCCGAATGGGGGGGATATGGAGTGGAGGGATGAGATACTGCGGCTTGCGCGGAGGCCGGAGGCGGTGGAGTGGGTGAAGGGGCTGCGGCGGAGGATTCACGAGCACCCTGAGCTTGCTTACGAGGAGGTGGAGACTGGGAGATTGATCATGGAGGAGCTTCGTGGCATGGGTGTCGACTATCATTTCCCGTTGGCGAAGACGGGGATCGTGGCTACCATTGGAACGGGCGATCCTCCGGTTGTCGCCCTTAGAGCTGATATGGACGCTCTTCCGATCCAGGAAGCGGTAGAATGGAAGCACAAGAGCAAGGTCCCTGGTAAAATGCACGCTTGTGGGCATGATGCACATGTGGCGATGCTTGTAGGTGCTGCAAAGATTTTAAAGGAGCGTGAGCATCATTTGAAGGGTACTGTTAAGTTACTCTTTCAGCCAGCAGAGGAATCAGGAATAGGTGCAAAGAGTATGATTGAAGATGGTGCCCTTACGGATGTAGAAGCTATATTTGCTGTTCACGTGTCACATGAACATCCCACTTCAGTCATTGGATCAAAGGCTGGTCCTTTACTTGCTGGGTGTGGCTTCTTTAAGGCAGTGATACAGGGAAGACATGGTCCAGCAGGAAATCCACGCTATTCTGTTGACCCTATTTTAGCTGCTTCAGCTTCCATAATTAGCTTGCAAAACATTGTGTCCAGGGAAGCTAATCCCTTGGATTCACAGGTGGTCTCAGTTGCAGCAGTGAATGGAGGAAGCAATCTGGAGCGAGTCCCGGAATCCATCATCATCGCCGGCACATTTAGAGCATTCTCAAATGCAAGCTTCCACACGCTTCGGCAAAGAATAGAGGAGGTGATGGTGAAGCAGTCGAGGGTGTACGGATGCGGAGCGAGCGTGGACTTCTTTGAGAAGGAGCGGTTCTACCCTCCAACGGTGAACGACGAGGGAATGTACGAGCACGTGAAGAGAGTGGCGGTGCGACTGCTGGGGCCGTGCAGGTACAGGACGGTTCCTCCGATGATGGGTGCCGAAGATTTTGCCTTTTACTCGGAGATCGTCCCGGCGGCCTTCTACTACATTGGGGTTCGCAACGAATCCCTCGGCTCAGTTCACACCGGCCATTCCCCTTTCTTCTTCATTGATGAAGACGTCCTCCCTGTCGGCGCCGCCCTTCACGCCGCTATCGCCGAGCGATTTCTCTCTGACCTCCCTTAAAAGTGCTGACTGCCTGCCTCTCCAGAAAGAATTTGAGGGATGCTACCCTATTTTCATTTTATTAAGATTGTAGTGTAACTTTATTATCAGCATTCAGTAAATTTATCCATCTCGGAGAAGATAGAAAAGAGGGAAGAAATGCTCTGCAATTTATTGTTTTGATTTTTTGAATTTTTGTTTTTTCTTAGTATAGGGGTGCAAATTGTTGGTTGATTATATGTAAATTTCTTATGAATGATGTTGCGGCACAACTGTTATGATCCTTGATTTAAATTCTTAGCATATCAAGGGTTCAAATTTCATAAAAAGAAAGTAAATTTATTTCCTTGATTTCAAATTTCAATTTTTGTGTCTGTATGTATATATTTGTATCTTTATTGGTACTGTATCATTGTGTATGTTGTTACAATTGGC

Network for GWHGAAEX008743

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01546.27	Peptidase_M20	142	456	1.60E-35

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016787	Molecular Function	hydrolase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	17.360
SRP064423	SRR2545915	Juvenile tuber	18.870
SRP108465	SRR5643513	five period of Gastrodia elata	39.070
	SRR5643514	five period of Gastrodia elata	37.380
	SRR5643515	five period of Gastrodia elata	39.560
	SRR5643524	five period of Gastrodia elata	38.410
	SRR5643525	five period of Gastrodia elata	84.920
	SRR5643528	five period of Gastrodia elata	73.240
	SRR5643658	five period of Gastrodia elata	85.480
	SRR5643659	five period of Gastrodia elata	46.750
	SRR5643660	five period of Gastrodia elata	45.530
	SRR5643661	five period of Gastrodia elata	50.900
	SRR5643662	five period of Gastrodia elata	47.080
	SRR5643663	five period of Gastrodia elata	42.560
	SRR5643664	five period of Gastrodia elata	46.440
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	30.540
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	22.870
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	34.620
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	30.070
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	27.160
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	29.310
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	29.020
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	28.240
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	33.150
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	29.580
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	37.140
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	37.140
SRP279888	Gastro	Gastrodia elata tuber	30.14
	Juven	Juvenile tuber	38.02
	Mother_Gastro	Mother tuber of Gastrodia elata	42.24
	Mother_Juven	Mother tuber of Juvenile	38.19