Detail information of GWHGAAEX008744/evm.TU.scaffold_23.26


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|392381699|ref|YP_005030896.1|1.00E-29putative Electron transport protein (SCO1/SenC/PrrC-like) [Azospirillum brasilense Sp245]
KOGKOG27924.00E-52Putative cytochrome C oxidase assembly protein
nrgi|672176020|ref|XP_008808073.1|1.48E-122PREDICTED: protein SCO1 homolog 2, mitochondrial isoform X1 [Phoenix dactylifera]
Swissprottr|Q8LAL0|SCO12_ARATH7.00E-74Protein SCO1 homolog 2, mitochondrial (Precursor)
trEMBLtr|M0T3F1|M0T3F1_MUSAM1.00E-112Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P02030_001}
TAIRAT4G397404.00E-52Thioredoxin superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000025745295775610+
Transcript Sequence

Network for GWHGAAEX008744

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02630.13SCO1-SenC2043464.80E-38
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.190
SRR2545915Juvenile tuber11.260
SRP108465SRR5643513five period of Gastrodia elata10.200
SRR5643514five period of Gastrodia elata11.250
SRR5643515five period of Gastrodia elata13.780
SRR5643524five period of Gastrodia elata11.130
SRR5643525five period of Gastrodia elata7.180
SRR5643528five period of Gastrodia elata7.630
SRR5643658five period of Gastrodia elata7.460
SRR5643659five period of Gastrodia elata9.280
SRR5643660five period of Gastrodia elata10.530
SRR5643661five period of Gastrodia elata11.280
SRR5643662five period of Gastrodia elata10.620
SRR5643663five period of Gastrodia elata13.740
SRR5643664five period of Gastrodia elata8.430
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.320
SRR6049655Rhizomagastrodiae_C368-T10_good_19.530
SRR6049656Rhizomagastrodiae_C368-T07_good_17.950
SRR6049657Rhizomagastrodiae_C368-T07_good_18.240
SRR6049658Rhizomagastrodiae_C368-T04_good_111.220
SRR6049659Rhizomagastrodiae_C368-T04_good_17.990
SRR6049660Rhizomagastrodiae_C368-T01_good_18.690
SRR6049661Rhizomagastrodiae_C368-T04_good_19.610
SRR6049662Rhizomagastrodiae_C368-T01_good_19.670
SRR6049663Rhizomagastrodiae_C368-T01_good_19.000
SRR6049664Rhizomagastrodiae_C368-T10_good_17.880
SRR6049665Rhizomagastrodiae_C368-T10_good_17.880
SRP279888GastroGastrodia elata tuber 9.55
JuvenJuvenile tuber11.04
Mother_GastroMother tuber of Gastrodia elata 14.53
Mother_JuvenMother tuber of Juvenile 14.34