Detail information of GWHGAAEX008745/evm.TU.scaffold_23.27


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG11244.00E-20FOG: TPR repeat
nrgi|413938936|gb|AFW73487.1|5.31E-21hypothetical protein ZEAMMB73_915701 [Zea mays]
Swissprottr|Q9SIN1|TTL3_ARATH8.00E-06Inactive TPR repeat-containing thioredoxin TTL3
trEMBLtr|A0A096U2Y8|A0A096U2Y8_MAIZE2.00E-21Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM2G578314_P01}
TAIRAT5G651604.00E-20tetratricopeptide repeat (TPR)-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000025777659778520+
Transcript Sequence

Network for GWHGAAEX008745

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.330
SRR2545915Juvenile tuber0.920
SRP108465SRR5643513five period of Gastrodia elata0.880
SRR5643514five period of Gastrodia elata0.080
SRR5643515five period of Gastrodia elata0.410
SRR5643524five period of Gastrodia elata0.090
SRR5643525five period of Gastrodia elata1.320
SRR5643528five period of Gastrodia elata1.550
SRR5643658five period of Gastrodia elata0.420
SRR5643659five period of Gastrodia elata0.890
SRR5643660five period of Gastrodia elata1.170
SRR5643661five period of Gastrodia elata1.290
SRR5643662five period of Gastrodia elata1.860
SRR5643663five period of Gastrodia elata0.450
SRR5643664five period of Gastrodia elata1.090
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.700
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_10.250
SRR6049657Rhizomagastrodiae_C368-T07_good_10.450
SRR6049658Rhizomagastrodiae_C368-T04_good_10.770
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.250
SRR6049661Rhizomagastrodiae_C368-T04_good_10.920
SRR6049662Rhizomagastrodiae_C368-T01_good_10.460
SRR6049663Rhizomagastrodiae_C368-T01_good_10.380
SRR6049664Rhizomagastrodiae_C368-T10_good_10.070
SRR6049665Rhizomagastrodiae_C368-T10_good_10.070
SRP279888GastroGastrodia elata tuber 1.30
JuvenJuvenile tuber0.26
Mother_GastroMother tuber of Gastrodia elata 0.40
Mother_JuvenMother tuber of Juvenile 0.71