Detail information of GWHGAAEX008749/evm.TU.scaffold_23.33


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|149980678|gb|ABR53728.1|4.98E-81DRE-binding protein DREB1 [Cymbidium insigne]
Swissprottr|O65665|ERF60_ARATH2.00E-53Ethylene-responsive transcription factor ERF060
trEMBLtr|A6YT27|A6YT27_9ASPA2.00E-81DRE-binding protein DREB1 {ECO:0000313|EMBL:ABR53728.1}
TAIRAT4G397805.00E-53Integrase-type DNA-binding superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000025964243966386+
Transcript Sequence

Network for GWHGAAEX008749

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.19AP21171652.10E-12
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAP2/ERF-ERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms26.990
SRR2545915Juvenile tuber7.790
SRP108465SRR5643513five period of Gastrodia elata38.700
SRR5643514five period of Gastrodia elata16.610
SRR5643515five period of Gastrodia elata22.700
SRR5643524five period of Gastrodia elata16.050
SRR5643525five period of Gastrodia elata42.960
SRR5643528five period of Gastrodia elata41.630
SRR5643658five period of Gastrodia elata28.840
SRR5643659five period of Gastrodia elata4.270
SRR5643660five period of Gastrodia elata3.930
SRR5643661five period of Gastrodia elata3.370
SRR5643662five period of Gastrodia elata4.730
SRR5643663five period of Gastrodia elata2.480
SRR5643664five period of Gastrodia elata4.220
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.010
SRR6049655Rhizomagastrodiae_C368-T10_good_124.670
SRR6049656Rhizomagastrodiae_C368-T07_good_112.850
SRR6049657Rhizomagastrodiae_C368-T07_good_122.230
SRR6049658Rhizomagastrodiae_C368-T04_good_139.280
SRR6049659Rhizomagastrodiae_C368-T04_good_151.690
SRR6049660Rhizomagastrodiae_C368-T01_good_112.440
SRR6049661Rhizomagastrodiae_C368-T04_good_130.640
SRR6049662Rhizomagastrodiae_C368-T01_good_121.740
SRR6049663Rhizomagastrodiae_C368-T01_good_112.230
SRR6049664Rhizomagastrodiae_C368-T10_good_131.830
SRR6049665Rhizomagastrodiae_C368-T10_good_131.830
SRP279888GastroGastrodia elata tuber 3.23
JuvenJuvenile tuber5.67
Mother_GastroMother tuber of Gastrodia elata 104.22
Mother_JuvenMother tuber of Juvenile 58.78