Detail information of GWHGAAEX008752/evm.TU.scaffold_23.38


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|521166219|ref|YP_008156883.1|8.00E-28sugar phosphate phosphatase [Serratia plymuthica S13]
nrgi|672160006|ref|XP_008799771.1|0PREDICTED: uncharacterized protein LOC103714342 [Phoenix dactylifera]
trEMBLtr|A0A067GMM5|A0A067GMM5_CITSI0Uncharacterized protein {ECO:0000313|EMBL:KDO79930.1}
TAIRAT2G258609.00E-71Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002511169511171302-
Transcript Sequence

Network for GWHGAAEX008752

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02130.16UPF00541612722.90E-32
PF08282.11Hydrolase_33225861.30E-50
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006364Biological ProcessrRNA processing
GO:0016787Molecular Functionhydrolase activity
GO:0004222Molecular Functionmetalloendopeptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.410
SRR2545915Juvenile tuber7.130
SRP108465SRR5643513five period of Gastrodia elata10.500
SRR5643514five period of Gastrodia elata11.300
SRR5643515five period of Gastrodia elata8.430
SRR5643524five period of Gastrodia elata10.830
SRR5643525five period of Gastrodia elata8.440
SRR5643528five period of Gastrodia elata8.230
SRR5643658five period of Gastrodia elata7.230
SRR5643659five period of Gastrodia elata8.880
SRR5643660five period of Gastrodia elata8.080
SRR5643661five period of Gastrodia elata8.550
SRR5643662five period of Gastrodia elata7.960
SRR5643663five period of Gastrodia elata7.940
SRR5643664five period of Gastrodia elata7.930
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.230
SRR6049655Rhizomagastrodiae_C368-T10_good_113.680
SRR6049656Rhizomagastrodiae_C368-T07_good_19.910
SRR6049657Rhizomagastrodiae_C368-T07_good_18.920
SRR6049658Rhizomagastrodiae_C368-T04_good_16.840
SRR6049659Rhizomagastrodiae_C368-T04_good_16.580
SRR6049660Rhizomagastrodiae_C368-T01_good_17.700
SRR6049661Rhizomagastrodiae_C368-T04_good_17.810
SRR6049662Rhizomagastrodiae_C368-T01_good_18.940
SRR6049663Rhizomagastrodiae_C368-T01_good_16.110
SRR6049664Rhizomagastrodiae_C368-T10_good_111.540
SRR6049665Rhizomagastrodiae_C368-T10_good_111.540
SRP279888GastroGastrodia elata tuber 7.27
JuvenJuvenile tuber16.47
Mother_GastroMother tuber of Gastrodia elata 7.76
Mother_JuvenMother tuber of Juvenile 12.80