Detail information of GWHGAAEX008754/evm.TU.scaffold_23.43


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG32062.00E-119Alpha-tubulin folding cofactor B
nrgi|695052688|ref|XP_009414412.1|9.16E-141PREDICTED: tubulin-folding cofactor B [Musa acuminata subsp. malaccensis]
Swissprottr|Q67Z52|TBCB_ARATH1.00E-122Tubulin-folding cofactor B
trEMBLtr|M0TW27|M0TW27_MUSAM3.00E-141Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P34250_001}
TAIRAT3G102202.00E-119tubulin folding cofactor B

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002512501881274860-
Transcript Sequence

Network for GWHGAAEX008754

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14560.5Ubiquitin_213973.50E-27
PF01302.24CAP_GLY1602261.30E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms58.100
SRR2545915Juvenile tuber49.660
SRP108465SRR5643513five period of Gastrodia elata34.990
SRR5643514five period of Gastrodia elata30.530
SRR5643515five period of Gastrodia elata28.500
SRR5643524five period of Gastrodia elata30.780
SRR5643525five period of Gastrodia elata57.070
SRR5643528five period of Gastrodia elata61.420
SRR5643658five period of Gastrodia elata52.670
SRR5643659five period of Gastrodia elata26.540
SRR5643660five period of Gastrodia elata32.390
SRR5643661five period of Gastrodia elata27.210
SRR5643662five period of Gastrodia elata27.070
SRR5643663five period of Gastrodia elata30.360
SRR5643664five period of Gastrodia elata32.570
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_133.980
SRR6049655Rhizomagastrodiae_C368-T10_good_158.450
SRR6049656Rhizomagastrodiae_C368-T07_good_135.590
SRR6049657Rhizomagastrodiae_C368-T07_good_140.500
SRR6049658Rhizomagastrodiae_C368-T04_good_131.550
SRR6049659Rhizomagastrodiae_C368-T04_good_138.830
SRR6049660Rhizomagastrodiae_C368-T01_good_130.730
SRR6049661Rhizomagastrodiae_C368-T04_good_135.880
SRR6049662Rhizomagastrodiae_C368-T01_good_125.850
SRR6049663Rhizomagastrodiae_C368-T01_good_129.640
SRR6049664Rhizomagastrodiae_C368-T10_good_136.120
SRR6049665Rhizomagastrodiae_C368-T10_good_136.120
SRP279888GastroGastrodia elata tuber 43.20
JuvenJuvenile tuber63.10
Mother_GastroMother tuber of Gastrodia elata 44.82
Mother_JuvenMother tuber of Juvenile 61.02