Gene detail

Detail information of GWHGAAEX008758/evm.TU.scaffold_23.51

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1339	6.00E-167	Aspartyl protease
nr	gi\|672185058\|ref\|XP_008812722.1\|	0	PREDICTED: LOW QUALITY PROTEIN: aspartic proteinase-like protein 1 [Phoenix dactylifera]
Swissprot	tr\|Q9LX20\|ASPL1_ARATH	2.00E-167	Aspartic proteinase-like protein 1 (Precursor)
trEMBL	tr\|M0T0W4\|M0T0W4_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P22890_001}
TAIR	AT5G10080	6.00E-167	Eukaryotic aspartyl protease family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000025	1433191	1463414	-

Transcript Sequence
>GWHTAAEX008758 AATGATTATCCTCAACCAGCATCACTAAAAGCTGCTCGAGAACGGCTGCTTCAGCTTTCCATCTTTTGTTTTTTCCTTCCGTCTATCACTTTCCACCTTCTGCTTCACATTGTAAAAACAAACCCCAAACGATCGACGCCTTCCTGTGCCAATCTCTCGCCAGCCCTAGCTCCTCGGGATCACTCCTTTTGTCACTCTTTCCGGCCCTTTCTCGTTATAGATTCGTTCTTGCTACAAGCAATGACTTCTCCGCTTTTTTTCCTTCCTTTCGCCTTCCTTTTTGTCGCTGGAGCCCAGTCCCTCGTCTTCTCATCGCCGATGGTTCATCGATTCTCCAAGGAGGCAATGGCAGCTGTGCCGGCGAGGGAGGTTGCTGGGTGGCCGGCTCGAGGTAGTGCGAAGTATTATGAGGTGTTGGTGAGGAGCGATCGCTTACGGCTGAGGCGGAGGCTCGGCTGGAGTGAGAATCCGACGCTATACCCAGTCGAGGGGAGCGAGACTCTGTCTCCAGGAAACGATTTTGGATGGTTACATTACACTTGGGTTGATGTTGGCACTCCAAATGTTTCATTCCTTGTTGCATTGGATGCTGGGAGTGATTTGTTTTGGGTCCCTTGCAATTGCATACAATGTGCTCCCCTGTCTGGCTATCATGGTAGTTTGGATAAAGATCTTGGCATGTATAATCCAAAGGAATCAAAATCAAGCAAGCCTCTTTCTTGCAGCCACGAGCTATGTACTTTGAGTAATAGCTGCAGGAGCCCAAAGCAACCTTGCCCTTACATAGCTAACTACTATTCAGAAAATACATCTACAACGGGCTTGCTGGTAGAGGACACTATGTACTTGAAAAATTCTGTTGAAGGCATACCAATACAAGCACATGTGATTATAGGGTGTGGAAGAAAGCAAAGTGGTGGTTATTTAGATGGTATTGCTCCTGATGGCGTTCTTGGTTTGGGATTTGGTGAAATTTCTGTTCCAAGCATGTTGGCAAGGGCTGGACTTGTGCGTAATTCTTTCTCCATGTGCTTTAGGAGTGATGACTCTGGTAGAGTATTTTTTGGTGATCAAGGGTTTTCTACTCAACAAACTACTCCATTTGTGGCATTGGATGGAAGTTATATTACCTATATTATTGGAGTGGAGAACTTTTGTGTTGGAACTTGGTGTCTTGGGAAAACCAGATTTCAGGCACTAGTTGACAGTGGTTCCTCTTTTACATTTCTACCTGAAGAACTGTACAGAAGGGTTAGTTTAGAGTTTGACAGGCAAATTAATGCTTCAAGGCTATATTATGAAGATTCTCCATTTGAATATTGTTACGCTGCCAATTCAATTGAGGCGCCTCTGGTTCCAGCTATCTCATTCACTTTTGCAGTGAATAAGACCTTTGAAGTCACACGCCCTATTTTCTCAATTTATGAAAAAGAGGAGCTAGCTGGATTTTGTATTGCCCTGCAAACTTCAGCAGAAAGTGTAGGAACAATTGGCCAAAATTTTATGATGGGATATCATATTGTCTTTGACAGAGAGAATTTGAAGCTAGGATGGTCTCGTTCAGATTGTCCTGACATCAGCAGCAGTGGAAGTACCACAAGAGCTCATTCCACTCCCCCACCACACAGAAAAACAGAGCAGCAAAGCTCCCCTAATGGCCTAGAAGTGACCCCCGCCATTGCTGGGAGGGCTCCCACCACCCCTTCTACAGCCTCTCTTCAGGAACCCCCCACCAGGTTCTCTTATATTCTATTTATCTGTCTCAGTTTTTTCATTTCTTTTGCTGTATAAACACTTTACTTTTAATATACAGTCTGTGAATATTCATATTTTATAGTTTATGTAAATCTTAGATCACTAAGCTGGCTCTTTTGTCCAATGCTTCTTTTTCCTGAGAATATAGCCATCTTAACACCCAAATTTTTGGTATTACATATCCAACACCCAAGCTCTTGATTTTTATATGCAGCCATTTTTATGATTGCAGTGATGAATGGAACAACGTTTTTGGTGTGATAAAATGACGGTTATGGTAGTAATTTTGAAAATGTTGATTTTTAGGTGTTGAATATGTAAAATGAAGATTGTGGTGGTACGAATAAAATTTTGATTTTTTTTTTTCTTCTTGC

Network for GWHGAAEX008758

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14543.5	TAXi_N	179	357	2.30E-37
PF14541.5	TAXi_C	396	519	3.00E-15

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006508	Biological Process	proteolysis
GO:0004190	Molecular Function	aspartic-type endopeptidase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	7.590
SRP064423	SRR2545915	Juvenile tuber	4.910
SRP108465	SRR5643513	five period of Gastrodia elata	6.650
	SRR5643514	five period of Gastrodia elata	8.110
	SRR5643515	five period of Gastrodia elata	5.920
	SRR5643524	five period of Gastrodia elata	6.900
	SRR5643525	five period of Gastrodia elata	5.240
	SRR5643528	five period of Gastrodia elata	5.520
	SRR5643658	five period of Gastrodia elata	5.410
	SRR5643659	five period of Gastrodia elata	4.270
	SRR5643660	five period of Gastrodia elata	4.710
	SRR5643661	five period of Gastrodia elata	5.270
	SRR5643662	five period of Gastrodia elata	3.590
	SRR5643663	five period of Gastrodia elata	4.760
	SRR5643664	five period of Gastrodia elata	4.490
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.290
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	9.500
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.220
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	7.370
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	7.240
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	8.150
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	5.790
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	6.180
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.850
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.220
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	6.960
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	6.960
SRP279888	Gastro	Gastrodia elata tuber	4.79
	Juven	Juvenile tuber	8.42
	Mother_Gastro	Mother tuber of Gastrodia elata	5.20
	Mother_Juven	Mother tuber of Juvenile	7.35