Detail information of GWHGAAEX008759/evm.TU.scaffold_23.52


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG10759.00E-09FOG: Reverse transcriptase
nrgi|566210414|ref|XP_006372295.1|1.04E-16hypothetical protein POPTR_0017s00301g [Populus trichocarpa]
trEMBLtr|U5FL56|U5FL56_POPTR4.00E-17Uncharacterized protein {ECO:0000313|EMBL:ERP50092.1}
TAIRAT4G156009.00E-09Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002514690921469451-
Transcript Sequence

Network for GWHGAAEX008759

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14111.5DUF42834743.50E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.770
SRR2545915Juvenile tuber0.440
SRP108465SRR5643513five period of Gastrodia elata4.070
SRR5643514five period of Gastrodia elata7.520
SRR5643515five period of Gastrodia elata5.640
SRR5643524five period of Gastrodia elata4.000
SRR5643525five period of Gastrodia elata8.020
SRR5643528five period of Gastrodia elata4.730
SRR5643658five period of Gastrodia elata5.980
SRR5643659five period of Gastrodia elata7.220
SRR5643660five period of Gastrodia elata6.790
SRR5643661five period of Gastrodia elata3.610
SRR5643662five period of Gastrodia elata3.310
SRR5643663five period of Gastrodia elata10.990
SRR5643664five period of Gastrodia elata6.310
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.800
SRR6049655Rhizomagastrodiae_C368-T10_good_11.500
SRR6049656Rhizomagastrodiae_C368-T07_good_15.480
SRR6049657Rhizomagastrodiae_C368-T07_good_19.680
SRR6049658Rhizomagastrodiae_C368-T04_good_113.530
SRR6049659Rhizomagastrodiae_C368-T04_good_113.230
SRR6049660Rhizomagastrodiae_C368-T01_good_110.170
SRR6049661Rhizomagastrodiae_C368-T04_good_19.340
SRR6049662Rhizomagastrodiae_C368-T01_good_13.760
SRR6049663Rhizomagastrodiae_C368-T01_good_110.130
SRR6049664Rhizomagastrodiae_C368-T10_good_11.380
SRR6049665Rhizomagastrodiae_C368-T10_good_11.380
SRP279888GastroGastrodia elata tuber 9.03
JuvenJuvenile tuber7.70
Mother_GastroMother tuber of Gastrodia elata 6.48
Mother_JuvenMother tuber of Juvenile 12.22