Gene detail

Detail information of GWHGAAEX008767/evm.TU.scaffold_23.65

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|347537908\|ref\|YP_004845332.1\|	1.00E-90	gamma-glutamyltransferase [Pseudogulbenkiania sp. NH8B]
KOG	KOG2410	0	Gamma-glutamyltransferase
nr	gi\|672162477\|ref\|XP_008801055.1\|	0	PREDICTED: gamma-glutamyltranspeptidase 1-like [Phoenix dactylifera]
Swissprot	tr\|Q8VYW6\|GAGT1_ARATH	0	Gamma-glutamyltranspeptidase 1 (Precursor)
trEMBL	tr\|M0SZ41\|M0SZ41_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P16620_001}
TAIR	AT4G39640	0	gamma-glutamyl transpeptidase 1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000025	1669255	1697569	-

Transcript Sequence
>GWHTAAEX008767 ATTAAACACTGTCAAGTCGCGCGTAAACGAAGTAGGCAAGGGTAGACGTCACCAGCGAGCCTCTAGGTGACCGCGGCGAAGACAAGCGACCGCGCCGATGGTTGACGTCGCTGGGCTTGACGTGTCCGGTGACGGGACGACCTTGTGACTTTGACTTCGCTGGCGAACAGGACGGCGAAGGAGACGATGTTCGAGTTTTTTTCGTATTAATTACATGCGATTTCATTGAAATTTCGTTTGCCAAAATCAACGATACCGAAACTTATTTTTCCTTGACCACGCAGGCCGCTTTTAAAAAAACAAACCGCGCACAACTAAATTTTCTTGCACATTGCTATGGCTTTAAATACAGGGCAGGGAGTACACGAAGAAAGCATCGCGAGGTGGAGCCATTCTTATTCCTGCGCCATGAGTGCTATGTTGCAATTATGGTTCATTGACTTTGTGGTCATACTAGCGTTCATCCCTGCTTTTGGAAGTGTGTCTGCAAAACACCGACATGAGGTGAGCATATCAAAGCATGGTGCTGTTGCCGCTGATGATCCTCGGTGCTCTAGGATTGGGAGAAATGTCCTAAAGTTGGGAGGTCATGCTGTGGATGCTACTGTGGCATCCATGTTTTGTTTGGGTGTTGTTAGCTCTGCATCGAGTGGCATTGGTGGTGGTGCCTTCATGCTTTTAAGGTTGGCCGATGGTAGAGTGCAGGCCTTTGACAGCAGGGAAACGGCTCCTCAAAATGCTTTCGAGAATATGTATGGTGGCAACATTTCCCTAAAAGCAATTGGTGCCCTTTCCGTTGCAGTACCTGGGGAACTTGCAGGGCTTCATGATGCCTGGAAGCAGCATGGGAAGCTTCCTTGGTCAGAACTTGTCAGGCCTGCTGCACGTCTTGCTCAAGGATTCATAATTTCTCCTTATTTTCATATGCAAATGGTTAAAACAATAGATGGGATTATGGCAGATGAAGGGCTGCGCCAAATATTTACATCAAACGGATCCCTTCTGCAAATTGGTGACATATGTCGCAATAAATGGCTTGCACTTACATTAGAAGCTATTGCAAGGCATGGACCGCAGGTTTTTTACAATGGTTCTGTTGGACATGCCTTGGTGGAAGATATTAGAAAGTCTGGAGGCATAATAACAATAAAAGATTTGCAAAGGTATAAAGTAAGCATCAGAGAGCCAATATCTACTGATGTCTTGGGACTTAATATCCTTGGAATGCCGCCACCTTCAACCGGAGGTGCTGGAATGACACTAATTCTAAATATCCTTGCTCAATATGGATTTCCTTCAGGTGTTTCTGGTTCTGTTGGGCTTCATCGTTTGATTGAATCACTGAAACACATGTTTGCTGTAAGAATGAAGCTAGGAGATCCTGATTTTGTAAATATATCTGACGTTCTTTCTGATATGCTATCCCCTAGGTTTGCATATGAGCTGAAGAAAACCATATTGGATAATATGACATTTAGTCCTGACCATTATGGCGGAAAGTGGAACATAATCAATGATCATGGAACAAGCCACTTATGCATTGTTGACAGAGATAGAAATGCAGTTTCAATGACCAGTACTATTAATTCATACTTTGGAGCACAGATTCTGTCACCAAGTACTGGCATTGTTCTTAACAATGAAATGGATGATTTTTCCATTCCTATGAATATTGCTAAAGATGTTCTACTGCCAGCTCCTGCGAACTTCATCAGATCATTCAAAAGGCCATTATCTTCGATGTCGCCAACAATTGTTGTCAAGGACGGGCAACTAAAAGCTGTAGTAGGTGCAAGTGGGGGAATTATGATTATTGCAGCGACTACAGAGGTTTTATTGAATCACTTTGCTAAGGGAATGGATCCACTAAGCTCTGTACTTGCTCCAAGGTTATATAACCAGTTGATACCTAATATTGTTGACTACGAGAACTGGACGACGGTGACTGGAGATCATTTTGAAGTTGCAGCTGCAGCAAGGGAAGCTTTGCAGAAGAAGGGACATGTCCTACAGGGCCTGGCTGGTGGGACTATTTCCCAATTCATTGTTCACAGCTTTAAGAAATCATCATCTCATGCAGGCGTTAAGTTTGGAAGCCTCACTGCAGTAAGTGACCCAAGGAAAGGAGGATTGCCTGCTGGCTACTGAGTCCTACATTGCAAGAACAGTGTACTTAGCAAGTAAATTTATTCTTGGAAACTGAAATTTTAGAAAATTATTTGAAGTTTCAGATAAAGAGTTGGTGATGTGTAAAGTGATGTTATAATATTAATATAAAGGGTTTTTTCTTGTTGGCTTAGTAGTTTAGTACATGTTGAGAAGTTAGAAAACATGCTTGTAGAGAACTATCAAGTTGTCAAGTCTTATTCTCTTAAAAATCTTAATTAGTGCTTTCGTAAAAAATTGTTATGAGATAATGAGGTATGCGATGGTAGTTAAGCAAGTAGATATTTCTAAAAAAGGTTGCTTAGAAT

Network for GWHGAAEX008767

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01019.20	G_glu_transpept	78	597	1.10E-166

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K18592	GGT1_5, CD224	Metabolic pathways	map01100
		Arachidonic acid metabolism	map00590
		Taurine and hypotaurine metabolism	map00430
		Cyanoamino acid metabolism	map00460
		Glutathione metabolism	map00480

Gene Ontology

GO term	Ontology	Name
GO:0006751	Biological Process	glutathione catabolic process
GO:0036374	Molecular Function	glutathione hydrolase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.610
SRP064423	SRR2545915	Juvenile tuber	1.440
SRP108465	SRR5643513	five period of Gastrodia elata	3.950
	SRR5643514	five period of Gastrodia elata	3.410
	SRR5643515	five period of Gastrodia elata	4.490
	SRR5643524	five period of Gastrodia elata	4.340
	SRR5643525	five period of Gastrodia elata	7.740
	SRR5643528	five period of Gastrodia elata	7.520
	SRR5643658	five period of Gastrodia elata	5.660
	SRR5643659	five period of Gastrodia elata	1.040
	SRR5643660	five period of Gastrodia elata	0.660
	SRR5643661	five period of Gastrodia elata	1.840
	SRR5643662	five period of Gastrodia elata	1.440
	SRR5643663	five period of Gastrodia elata	1.630
	SRR5643664	five period of Gastrodia elata	1.080
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.180
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.480
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.280
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.240
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.100
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.150
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.330
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.380
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.270
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.260
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	1.310
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	1.310
SRP279888	Gastro	Gastrodia elata tuber	2.88
	Juven	Juvenile tuber	2.94
	Mother_Gastro	Mother tuber of Gastrodia elata	7.28
	Mother_Juven	Mother tuber of Juvenile	6.88