Gene detail

Detail information of GWHGAAEX008770/evm.TU.scaffold_23.67

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|434396763\|ref\|YP_007130767.1\|	5.00E-172	ABC-1 domain-containing protein [Stanieria cyanosphaera PCC 7437]
KOG	KOG1235	0	Predicted unusual protein kinase
nr	gi\|743839556\|ref\|XP_010937033.1\|	0	PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic isoform X1 [Elaeis guineensis]
Swissprot	tr\|Q94BU1\|Y1181_ARATH	7.00E-69	Uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic (Precursor)
trEMBL	tr\|A0A067KGA1\|A0A067KGA1_JATCU	0	Uncharacterized protein {ECO:0000313\|EMBL:KDP35226.1}
TAIR	AT5G64940	0	ABC2 homolog 13

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000025	1734044	1797873	+

Transcript Sequence
>GWHTAAEX008770 CGCACCTTACACATGAACAGGCACCGGTATGATTTCCATTCACTTAGTAAGGAACTCTTTTAAAGTAGCCGGCTCTCTAACCCAAAATCTCCAATCCCTCGTCTCACACGTCCGTTCGTCTCATCTATTCCTGCTCCGCGAGCTCCGAAAGCTAGAATTTGATAGCGCCTTGGCGCAAATCTAGGGCGAATTCCGGTATGTCGGCATTGACTGCAAGATCACTCGCAGACAACGCCATCTTCCTCTCCTGCCTGCGCTCTGTGCGCGTTCCTCCGGTCAGGCTCGTTCTCCAGCATTCCCGTCGGCGGAGTACGAATGCAAGCCGTGATACTTATTTGAACGGGCATGTGCAAGGAAATTGGAGTTTGGTGAAATACACCGGTGGAAGTAAACCAGCTGCCGAGGAAGCCAACGGTTTAACATTAGAGAATGAGAGAAAGAAGAGGATGGAAGAACTCGGCAAAGAGGATGCATGGTTTAAGGAACCTCAGGATAAAGAGGTCTGTTCTGCTCCTGTTGGGCGTTGGAACAGATTAAAATCTTATTCAACAATCCTGAGAACTTTGGAGATTTGGGGGTTTATTTTTGCATTTAGTTTCAAGGTTTGGCTGAGCAACCAAAAGTTCACTTATCGTGGAGGAATGACTGAGGAAAAAATGTTGGTTAGACGAAAAATCTTAGCAAAATGGTTAAAGAAGAGTATTCTAAGATTAGGACCCACATTTATAAAAATTGGGCAGCAGTTTTCTACAAGGGTGGACATCCTTGCACAAGAATATGTTGATCAATTGTCCGAACTTCAGGATCAAGTCCCTCCATTTTCTTCTGAAACTTCAGTTTCTATTATTGAAGAAGAACTTGGTAGCCCAGTTTATGAAATTTTTGATCGATTTGATCACGAACCCATTGCTGCTGCTAGCTTAGGTCAAGTGCATCGTGCAAGTTTGAAGGGGCAAGAAGTTGTTATTAAAGTACAGAGACCGGGTCTGAAGGACCTATTTGATATTGATTTGAAAAATTTGAGGGTAATTGCTGGATACCTTCAGAGAATAGACCCAAAATCAGATGGAACTAGGAGAGATTGGGTTGCTATCTATGATGAGTGTGCGACTATTCTATATCAGGAGATAGACTATAGAAAAGAGGCAGCTAATGCTGAACTATTTTCTCACAACTTTAAAGACATGGACTATGTTAAAGTGCCAAAAGTTTTTTGGGAATACACCACTCCACAGGTATTGACAATGGAATATGTTCCAGGGATTAAAATAAACAGAATAAAACAGCTGGACAAGTTGGGTATTGATCGACAGAGGCTAGGTAGGTATGCTGTTGAATCTTACCTCGAGCAGATTCTTTCCCATGGTTTTTTTCATGCTGATCCACACCCTGGAAATATTGCTGTTGATGATGTCAGTGGTGGGAGGCTTATATTTTATGATTTTGGAATGATGGGAAGCATTGGTCCAAATATCAGGGAAGGGCTACTTGAGGCATTTTACGGAATTTATGAGAAAAATCCTGATAGAGTACTCCAAGCAATGATTCAAATGGGTGTCCTAGTTCCAACAGGAGACTTGACAGCTGTGAGGAGGATAACACAGTACTTTCTTAACAGCTTTGAGGAGCGTCTTGTAGCCCAAAGGAGAGAAAGAGAGATGGCAGCTGCTGAACTAGGATTCAAAAAGAAGTTGAGTAAAGAAGAAAAAGTTCAAAAGAGGAAGGAAAAGCTTTCTGCCATTGGAGAAGACCTATTGGCAATTGCTGCTGACCAGCCTTTCCGCTTTCCAGCAACTTTCACCTTTGTTGTTAGGGCATTTTCAGTGCTAGATGGGATTGGGAAGGGTCTAGACCCTAGATTTGACATCACTGAAATTGCAAAACCTTATGCCATGGAGTTACTAAGGTTCCAGGAAGTTGGATTTGAGGTTATTGTAAAGGAGCTTAGGAAAAGATGGGACAAGCAGTGCCGCACATTTTACAACTTCTTCAGACAGGCTGATAGAGTTGAAAAGCTTGCTGAAATAATGCAAAGATTGGAGCAAGGAGATCTTAAGCTTCGTGTACGAACTTTGGAATCGGAGAGAGCATTCCAAAGGGTTGCTGCTGCCCAAAAAACAATTGGTAATGCAGTCGCTGCTGGGAGCCTAATTAACCTGGCCACGATCTTATACTGCAATTCAATTCGGGCTCCGGCGCTGATAGCCTATCTCTTTTGCGGCTTATTCGGAGCTCAAGTATTAATGGGCATTCTCACTGTAAAGCAGCTGGACGGCCGAGAAAGATTGATTACAGGAACCGCTTGAAGGAGGAGCCCCGCCAACATAATATATAGCTGCTTCATTCTACTTTTTATTTTAATTTTCGATAATCTTGCTGTTGCCTGCCTGTTGTGCTGCTGCTCTACACGTGCACGAATATGCCTACGTTGTTGGTTTACATATGCCGTGCTTAGTTTGGCCACAAAGATGATTCGATTCTCTCCAAGCTCTTTGAAGACAACTATTTTAAACGGTGAAAATCTTTGATTCTCTCCAAACTCTCCAAAGTAAAGAAGGTTCGATTTGATTCGACCTGCGGCACAGTGTAGGCGAAGCTCCCTCGAGCAGAACATGTACTTCTTCGGGCGTGCCCCGCCTAAAGTAGAAAATAAGCCCAAGAATCCAAATTCCTTTCTTCCGCTATTATCCCTCAATTATCCAAATGTATAAGAATTTATTATCACAAGCCTTCATACTTAAAAACCATTAGGAAGATAATGGATGATCGTAGGGATGCCGCTTCTGATTTGTTGTTCTTCGCTTGTTCTTGATTTTGTTGCAGAATATGTGCTGTATTCTATGATGCTCTTGAGATTTGAACTCTTGACATGTTGAATATAAATATTAGGCCTAAACTATTGGCTCATAATGCCATTAATTTTTTTTTAAAATGAG

Network for GWHGAAEX008770

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03109.15	ABC1	219	339	5.80E-37

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	7.290
SRP064423	SRR2545915	Juvenile tuber	9.360
SRP108465	SRR5643513	five period of Gastrodia elata	11.300
	SRR5643514	five period of Gastrodia elata	10.650
	SRR5643515	five period of Gastrodia elata	11.570
	SRR5643524	five period of Gastrodia elata	12.240
	SRR5643525	five period of Gastrodia elata	9.910
	SRR5643528	five period of Gastrodia elata	8.030
	SRR5643658	five period of Gastrodia elata	9.390
	SRR5643659	five period of Gastrodia elata	10.450
	SRR5643660	five period of Gastrodia elata	8.980
	SRR5643661	five period of Gastrodia elata	8.860
	SRR5643662	five period of Gastrodia elata	9.140
	SRR5643663	five period of Gastrodia elata	10.370
	SRR5643664	five period of Gastrodia elata	9.190
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	8.510
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	9.880
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	9.990
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	8.400
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	5.850
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	5.500
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	6.300
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	6.550
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	9.300
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	6.980
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	10.220
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	10.220
SRP279888	Gastro	Gastrodia elata tuber	7.21
	Juven	Juvenile tuber	13.20
	Mother_Gastro	Mother tuber of Gastrodia elata	9.03
	Mother_Juven	Mother tuber of Juvenile	11.56