Detail information of GWHGAAEX008778/evm.TU.scaffold_23.76


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG20612.00E-93Uncharacterized MYND Zn-finger protein
nrgi|672168915|ref|XP_008804474.1|2.02E-145PREDICTED: programmed cell death protein 2-like [Phoenix dactylifera]
trEMBLtr|M0T990|M0T990_MUSAM3.00E-114Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P22420_001}
TAIRAT5G648302.00E-93programmed cell death 2 C-terminal domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002520102802033986+
Transcript Sequence

Network for GWHGAAEX008778

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04194.12PDCD2_C2333761.00E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005737Cellular Componentcytoplasm

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.750
SRR2545915Juvenile tuber16.850
SRP108465SRR5643513five period of Gastrodia elata14.590
SRR5643514five period of Gastrodia elata13.990
SRR5643515five period of Gastrodia elata15.430
SRR5643524five period of Gastrodia elata14.560
SRR5643525five period of Gastrodia elata14.200
SRR5643528five period of Gastrodia elata11.800
SRR5643658five period of Gastrodia elata13.490
SRR5643659five period of Gastrodia elata13.280
SRR5643660five period of Gastrodia elata11.400
SRR5643661five period of Gastrodia elata11.650
SRR5643662five period of Gastrodia elata14.960
SRR5643663five period of Gastrodia elata13.120
SRR5643664five period of Gastrodia elata12.330
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.820
SRR6049655Rhizomagastrodiae_C368-T10_good_19.380
SRR6049656Rhizomagastrodiae_C368-T07_good_111.720
SRR6049657Rhizomagastrodiae_C368-T07_good_114.030
SRR6049658Rhizomagastrodiae_C368-T04_good_112.360
SRR6049659Rhizomagastrodiae_C368-T04_good_113.060
SRR6049660Rhizomagastrodiae_C368-T01_good_111.280
SRR6049661Rhizomagastrodiae_C368-T04_good_111.270
SRR6049662Rhizomagastrodiae_C368-T01_good_111.510
SRR6049663Rhizomagastrodiae_C368-T01_good_111.030
SRR6049664Rhizomagastrodiae_C368-T10_good_113.740
SRR6049665Rhizomagastrodiae_C368-T10_good_113.740
SRP279888GastroGastrodia elata tuber 17.16
JuvenJuvenile tuber28.57
Mother_GastroMother tuber of Gastrodia elata 13.94
Mother_JuvenMother tuber of Juvenile 21.94