Detail information of GWHGAAEX008788/evm.TU.scaffold_23.88


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17253.00E-36Protein involved in membrane traffic (YOP1/TB2/DP1/HVA22 family)
nrgi|720007727|ref|XP_010258395.1|1.33E-43PREDICTED: HVA22-like protein a [Nelumbo nucifera]
Swissprottr|Q9S7V4|HA22A_ARATH8.00E-37HVA22-like protein a
trEMBLtr|I1IFA4|I1IFA4_BRADI5.00E-43Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI3G59310.3}
TAIRAT1G745203.00E-36HVA22 homologue A

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002523713562394630-
Transcript Sequence

Network for GWHGAAEX008788

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03134.18TB2_DP1_HVA226533.60E-10
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms52.330
SRR2545915Juvenile tuber62.630
SRP108465SRR5643513five period of Gastrodia elata55.830
SRR5643514five period of Gastrodia elata76.700
SRR5643515five period of Gastrodia elata61.960
SRR5643524five period of Gastrodia elata74.000
SRR5643525five period of Gastrodia elata120.390
SRR5643528five period of Gastrodia elata130.110
SRR5643658five period of Gastrodia elata137.030
SRR5643659five period of Gastrodia elata47.280
SRR5643660five period of Gastrodia elata42.370
SRR5643661five period of Gastrodia elata46.880
SRR5643662five period of Gastrodia elata49.580
SRR5643663five period of Gastrodia elata51.880
SRR5643664five period of Gastrodia elata44.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_135.030
SRR6049655Rhizomagastrodiae_C368-T10_good_145.610
SRR6049656Rhizomagastrodiae_C368-T07_good_139.220
SRR6049657Rhizomagastrodiae_C368-T07_good_133.070
SRR6049658Rhizomagastrodiae_C368-T04_good_134.590
SRR6049659Rhizomagastrodiae_C368-T04_good_133.910
SRR6049660Rhizomagastrodiae_C368-T01_good_128.350
SRR6049661Rhizomagastrodiae_C368-T04_good_134.580
SRR6049662Rhizomagastrodiae_C368-T01_good_135.720
SRR6049663Rhizomagastrodiae_C368-T01_good_137.560
SRR6049664Rhizomagastrodiae_C368-T10_good_158.650
SRR6049665Rhizomagastrodiae_C368-T10_good_158.650
SRP279888GastroGastrodia elata tuber 41.58
JuvenJuvenile tuber39.08
Mother_GastroMother tuber of Gastrodia elata 47.73
Mother_JuvenMother tuber of Juvenile 40.66