Detail information of GWHGAAEX008789/evm.TU.scaffold_23.89


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|479127766|ref|YP_005067726.1|7.00E-28HAD-superfamily hydrolase [Arthrospira platensis NIES-39]
KOGKOG30857.00E-104Predicted hydrolase (HAD superfamily)
nrgi|672175352|ref|XP_008807726.1|4.71E-124PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein 3 [Phoenix dactylifera]
trEMBLtr|M0U2X1|M0U2X1_MUSAM2.00E-116Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P23640_001}
TAIRAT1G143107.00E-104Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002523962182436554+
Transcript Sequence

Network for GWHGAAEX008789

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13419.5HAD_21422691.10E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016787Molecular Functionhydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms38.320
SRR2545915Juvenile tuber33.440
SRP108465SRR5643513five period of Gastrodia elata27.710
SRR5643514five period of Gastrodia elata28.040
SRR5643515five period of Gastrodia elata25.760
SRR5643524five period of Gastrodia elata27.700
SRR5643525five period of Gastrodia elata6.250
SRR5643528five period of Gastrodia elata7.530
SRR5643658five period of Gastrodia elata7.700
SRR5643659five period of Gastrodia elata19.760
SRR5643660five period of Gastrodia elata21.040
SRR5643661five period of Gastrodia elata14.150
SRR5643662five period of Gastrodia elata27.020
SRR5643663five period of Gastrodia elata21.850
SRR5643664five period of Gastrodia elata31.690
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_131.110
SRR6049655Rhizomagastrodiae_C368-T10_good_117.540
SRR6049656Rhizomagastrodiae_C368-T07_good_128.410
SRR6049657Rhizomagastrodiae_C368-T07_good_131.660
SRR6049658Rhizomagastrodiae_C368-T04_good_130.370
SRR6049659Rhizomagastrodiae_C368-T04_good_128.640
SRR6049660Rhizomagastrodiae_C368-T01_good_129.290
SRR6049661Rhizomagastrodiae_C368-T04_good_127.700
SRR6049662Rhizomagastrodiae_C368-T01_good_128.150
SRR6049663Rhizomagastrodiae_C368-T01_good_121.880
SRR6049664Rhizomagastrodiae_C368-T10_good_119.540
SRR6049665Rhizomagastrodiae_C368-T10_good_119.540
SRP279888GastroGastrodia elata tuber 39.40
JuvenJuvenile tuber25.00
Mother_GastroMother tuber of Gastrodia elata 6.69
Mother_JuvenMother tuber of Juvenile 10.18