Detail information of GWHGAAEX008794/evm.TU.scaffold_23.96


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG15081.00E-73DNA replication factor/protein phosphatase inhibitor SET/SPR-2
nrgi|743839845|ref|XP_010937112.1|3.81E-83PREDICTED: NAP1-related protein 2-like isoform X5 [Elaeis guineensis]
Swissprottr|Q8LC68|NRP2_ARATH4.00E-74NAP1-related protein 2
trEMBLtr|A0A068U125|A0A068U125_COFCA9.00E-81Coffea canephora
TAIRAT1G188001.00E-73NAP1-related protein 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002525344352543898-
Transcript Sequence

Network for GWHGAAEX008794

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00956.17NAP771744.80E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006334Biological Processnucleosome assembly
GO:0005634Cellular Componentnucleus

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms69.070
SRR2545915Juvenile tuber63.770
SRP108465SRR5643513five period of Gastrodia elata45.020
SRR5643514five period of Gastrodia elata55.770
SRR5643515five period of Gastrodia elata44.190
SRR5643524five period of Gastrodia elata40.770
SRR5643525five period of Gastrodia elata35.010
SRR5643528five period of Gastrodia elata29.800
SRR5643658five period of Gastrodia elata23.510
SRR5643659five period of Gastrodia elata46.770
SRR5643660five period of Gastrodia elata48.770
SRR5643661five period of Gastrodia elata52.260
SRR5643662five period of Gastrodia elata48.360
SRR5643663five period of Gastrodia elata44.920
SRR5643664five period of Gastrodia elata36.110
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_161.740
SRR6049655Rhizomagastrodiae_C368-T10_good_144.750
SRR6049656Rhizomagastrodiae_C368-T07_good_158.710
SRR6049657Rhizomagastrodiae_C368-T07_good_164.600
SRR6049658Rhizomagastrodiae_C368-T04_good_156.500
SRR6049659Rhizomagastrodiae_C368-T04_good_158.060
SRR6049660Rhizomagastrodiae_C368-T01_good_171.770
SRR6049661Rhizomagastrodiae_C368-T04_good_161.930
SRR6049662Rhizomagastrodiae_C368-T01_good_160.340
SRR6049663Rhizomagastrodiae_C368-T01_good_169.850
SRR6049664Rhizomagastrodiae_C368-T10_good_173.880
SRR6049665Rhizomagastrodiae_C368-T10_good_173.880
SRP279888GastroGastrodia elata tuber 49.68
JuvenJuvenile tuber43.94
Mother_GastroMother tuber of Gastrodia elata 16.72
Mother_JuvenMother tuber of Juvenile 24.36