Detail information of GWHGAAEX008795/evm.TU.scaffold_23.97


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG15086.00E-94DNA replication factor/protein phosphatase inhibitor SET/SPR-2
nrgi|743839848|ref|XP_010937113.1|1.20E-110PREDICTED: NAP1-related protein 2-like isoform X6 [Elaeis guineensis]
Swissprottr|Q69JW2|NRP2_ORYSJ2.00E-95NAP1-related protein 2
trEMBLtr|D7SIC8|D7SIC8_VITVI5.00E-109Putative uncharacterized protein {ECO:0000313|EMBL:CBI15238.3}
TAIRAT1G188006.00E-94NAP1-related protein 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002526019362622496-
Transcript Sequence

Network for GWHGAAEX008795

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00956.17NAP312232.10E-32
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006334Biological Processnucleosome assembly
GO:0005634Cellular Componentnucleus

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms433.510
SRR2545915Juvenile tuber503.700
SRP108465SRR5643513five period of Gastrodia elata209.180
SRR5643514five period of Gastrodia elata190.530
SRR5643515five period of Gastrodia elata193.730
SRR5643524five period of Gastrodia elata182.530
SRR5643525five period of Gastrodia elata153.990
SRR5643528five period of Gastrodia elata135.940
SRR5643658five period of Gastrodia elata116.840
SRR5643659five period of Gastrodia elata324.910
SRR5643660five period of Gastrodia elata333.100
SRR5643661five period of Gastrodia elata312.320
SRR5643662five period of Gastrodia elata286.460
SRR5643663five period of Gastrodia elata288.230
SRR5643664five period of Gastrodia elata284.950
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1314.670
SRR6049655Rhizomagastrodiae_C368-T10_good_1288.200
SRR6049656Rhizomagastrodiae_C368-T07_good_1256.720
SRR6049657Rhizomagastrodiae_C368-T07_good_1339.080
SRR6049658Rhizomagastrodiae_C368-T04_good_1277.010
SRR6049659Rhizomagastrodiae_C368-T04_good_1339.070
SRR6049660Rhizomagastrodiae_C368-T01_good_1294.530
SRR6049661Rhizomagastrodiae_C368-T04_good_1306.740
SRR6049662Rhizomagastrodiae_C368-T01_good_1221.510
SRR6049663Rhizomagastrodiae_C368-T01_good_1237.230
SRR6049664Rhizomagastrodiae_C368-T10_good_1219.160
SRR6049665Rhizomagastrodiae_C368-T10_good_1219.160
SRP279888GastroGastrodia elata tuber 273.91
JuvenJuvenile tuber200.38
Mother_GastroMother tuber of Gastrodia elata 93.27
Mother_JuvenMother tuber of Juvenile 150.43