Detail information of GWHGAAEX008796/CADD00702.1.gene


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG08749.00E-31Sphingolipid hydroxylase
nrgi|743773387|ref|XP_010917035.1|8.30E-37PREDICTED: sphinganine C(4)-monooxygenase 1-like [Elaeis guineensis]
Swissprottr|Q9AST3|SBH2_ARATH3.00E-31Sphinganine C(4)-monooxygenase 2
trEMBLtr|M0SAX1|M0SAX1_MUSAM5.00E-36Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P01530_001}
TAIRAT1G142909.00E-31sphingoid base hydroxylase 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002526304632637528-
Transcript Sequence

Network for GWHGAAEX008796

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K04713SUR2 Metabolic pathways map01100
Sphingolipid metabolismmap00600

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.230
SRR2545915Juvenile tuber0.690
SRP108465SRR5643513five period of Gastrodia elata15.480
SRR5643514five period of Gastrodia elata19.150
SRR5643515five period of Gastrodia elata56.320
SRR5643524five period of Gastrodia elata15.350
SRR5643525five period of Gastrodia elata74.420
SRR5643528five period of Gastrodia elata142.610
SRR5643658five period of Gastrodia elata44.570
SRR5643659five period of Gastrodia elata115.090
SRR5643660five period of Gastrodia elata34.920
SRR5643661five period of Gastrodia elata76.730
SRR5643662five period of Gastrodia elata81.060
SRR5643663five period of Gastrodia elata96.570
SRR5643664five period of Gastrodia elata129.840
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.150
SRR6049655Rhizomagastrodiae_C368-T10_good_131.920
SRR6049656Rhizomagastrodiae_C368-T07_good_114.510
SRR6049657Rhizomagastrodiae_C368-T07_good_123.830
SRR6049658Rhizomagastrodiae_C368-T04_good_12.380
SRR6049659Rhizomagastrodiae_C368-T04_good_11.860
SRR6049660Rhizomagastrodiae_C368-T01_good_111.670
SRR6049661Rhizomagastrodiae_C368-T04_good_11.300
SRR6049662Rhizomagastrodiae_C368-T01_good_14.900
SRR6049663Rhizomagastrodiae_C368-T01_good_14.810
SRR6049664Rhizomagastrodiae_C368-T10_good_134.150
SRR6049665Rhizomagastrodiae_C368-T10_good_134.150
SRP279888GastroGastrodia elata tuber 15.38
JuvenJuvenile tuber3.96
Mother_GastroMother tuber of Gastrodia elata 133.40
Mother_JuvenMother tuber of Juvenile 190.45