Gene detail

Detail information of GWHGAAEX008803/evm.TU.scaffold_23.108

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743839934\|ref\|XP_010937137.1\|	0	PREDICTED: uncharacterized protein LOC105056586 [Elaeis guineensis]
trEMBL	tr\|M0TJD9\|M0TJD9_MUSAM	2.00E-179	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr7P21020_001}
TAIR	AT5G39780	9.00E-104	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000025	2742045	2745650	+

Transcript Sequence
>GWHTAAEX008803 TTGATGGGCGCTGATCAAATTGAATGACCAAACCAAAAATTCAATATCCATATTAAGTTCTTCTGAATGCAAAAACTAAGATATACTTTTATTTGATCTGTGTTTGATGCTAACCCACCATAGATCAATCTTTGAAAAGACTACTACTTCTCCCACCAACTGATCATTTCAAAGAAATAAAGGATCAGTGAAAAAATATGTGACAAAAATAACAGATTGAACCTTTCTATTGTTTCTCAGACAAAATAACGGAGTTTTAATCAGCAATTTCAGGTTTCTTAGACATCACACAATTCCCGTTTTTCCGTTCCCATAATCCGATCAATTAGGTCAGATTTCACTCTTTTTGAATGAATCGAGTTTGTTTATCTTCCCAAAGGGTTTCCAGTTTCCATGGAGAAGAAGTAAGACAGAGCGGACTCTTATTAAGGGGACTTCGGTCGTTCTAAAGATTGGTGAATTCAGCGCATAGAAACCATGGGGGGTAGAAAAATTGGGTTTTTGGTCACTTCTTGCTTGATTTTTCTTCTGAGATCGGTGGCTTTCTACTTTGAATTCTTGCTCCGGCTTGTTTTCAGGTTGTTTCTATTTGCTCAACTTGTTTCAGACTTATGTACACATGAATATGAATTCTATTTTTCATCTATCTCTTTATTCCGCAGAGTCAAAACCAGAGATAAATCCTACAGAATTGATTCTAGCATCTCAGATTCAACCAGAATTGAAAAAAGGATGCCTGCGTTTAGCTTCAAGTATCAAGGTCAGAATTTTGAGGAGAGAATTACAAGGATTGGAGAGAAAGAACAGGGTCGCTCGATTGCTGCAGATGTTCGGAATTGTCAGTTCATATCTGGGAATGATTTCTACGGCTTTGTGGAAGAGCCAGAGAGCAAAAGTGTTCGTGTCCATGAGCCCTTTCCCGGCTTCAAAGAAGAATCGGATGCGGAGTTGAGATTCTTATCTGTAGAGGATTTTCTTAAGCCCTCCAAAGAATCCAATTTTGAAAAAGAGAGCCGTAGTGATGATGGCAGAATTATGAGTTCACTGTTTGATAAAAGTTTCCTGAGTTCTGAAACGAGCTCAAAGCGGGATTTCTTCAGTTTTGATTTTGAATCTGATACTGAATCGTCAAGCGATGGATACTCTGTGAAAGAACTTATATGCAGTTCAGACACAGATGATATTTTATCAGAGAACGGATTAGACTCAATTGGGAATATCATTGATGAAGAAGAAACCATTGCAGAGAAGCTTCCTTCTCTTGTTGAAGAAGAAATTAGCTTGGAGAGCAATTCAAATGAAATTTTTACAGAAAATAAATTAATTGGAACCTCTTCCTTGGAAAGTGGAAATTCAAGTGATCCTGATTCAAGGGCTGAAAATACTATGCAAATAGAATTCATTAACGAAATTTCTTCTTCAGAGAATGATAGCACAAAGCCAGATGACTTCAAAGGAGCCCAATTGGTGAAAGATGAGGCTGACTTAGATCCAAAGGCAGAGGTTTTGGCAATTGATGGATCAAATTATGAAGCCAGTAGTTCTTCAAAAGTAGAGGAAAAGAAGGCAGAAGAATCCAAATCTCTGGATTTGAATTCCGAGGAGTTGGATGAGATATGGGAGCACTTGGATCTCATTGAGCAACTCAAGATGGAACTCAAGAAAGTTAGAGCCATTGGTCTTCCTACCATCTTAGAGGAATCCGAAAGCCCAAAGGCAATCGACTGTTTGAGGCCTCTAAGGATCAATGAGCAGTTCTTGTTTGATGGCCCAATGGATGAGCTTCAAAAGTTTTACAAAAGCTACAGAGAGAGAATGAGGAAATTCGATATTTTGAATTATCAGAAGATGTATGCAATGGGCTTTCTCCAACTGAAAAACCCTCTTAATTCAATGGGAACCCAAAGGCAATTCCTGTCAGCGTTCATGTCTCAAATCTCTCAATGCCTCCTACCTTTCTGCCAAAAGAAATTTGAAAATGATCCATCCAAGAAGCTGGTAAAGGATTTGAAGTGTGATCTAGAAACAGTTTATGTTGGCCAGACTTGCCTCTCATGGGAATTCCTCAGATGGCAGTACGAAAAATCTCGCGAATTGCCGGAGTCCGATCCTCACAGAAGCCGTCGATACAACCAGGTTGCTGATGAATTTCAAAAATTTCAAGTCTTGGCTCAGAGATTTACAGAAAATGAGATATTTCAGGGGCCAAGGCTTCCAAATTATGTCAAACAGAGATGCCTTCTTCAAAATCTTCTTCAAGTGCCAATCATGAGAGAGGATTCTTTGTCGGATAATATGGAGAGGAAGGAGGCGGATTATGTTGTTACCAGTGAAATGTTGGAGGATATAATGGAAGAAGCGATAAGAATATTTTGGGAGTTTGTTAAGGCAGAAAAACATGAAACGCCATTGCTAATCAAACTTCTGTTTGATAATAATGTTGAAGTTCAGGATCCTTCCGACTATGAGCTCATGGATGAAATTCAGCTGAATTTGCAGAAGAAAGAGAAGAAGCTAAAGGATATTCTGAGGACTGGCAATTGCGTAGTTAAGAAGTTCAAGAAGCCGAAGGAAGACAGATCAAATCAAGACCTCTTCTTCTCTCAAGTAGATCTAAAATTGGTGTCAAGAGTTCTCAGAATGCCAAGGATAACAAGGGATCAGTTGGCTTGGTGCGATAAAAAGCTAAGTAAGATTAGTTTTAATGAAGGAAAAGTTCGCAGGGAATCATCATTTTTGTTGTTCCCCTGTTAGAAAGGAAATAGGAATACTCTTATAGATTTATGTTATAATGTGAATGTAGATATTCATAGTAAAGTTTACTGTATAGCACTTGTATATCATGCAAGAGGATATATTGACACTGAAAACTTGATGCATTATCATTCTAATAAAGGATATTAATACCTTTCTTACTGTATTATTCTT

Network for GWHGAAEX008803

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module12

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07891.11	DUF1666	514	757	8.30E-96

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	10.880
SRP064423	SRR2545915	Juvenile tuber	8.390
SRP108465	SRR5643513	five period of Gastrodia elata	7.940
	SRR5643514	five period of Gastrodia elata	9.950
	SRR5643515	five period of Gastrodia elata	8.420
	SRR5643524	five period of Gastrodia elata	10.920
	SRR5643525	five period of Gastrodia elata	13.140
	SRR5643528	five period of Gastrodia elata	10.770
	SRR5643658	five period of Gastrodia elata	14.390
	SRR5643659	five period of Gastrodia elata	3.140
	SRR5643660	five period of Gastrodia elata	3.160
	SRR5643661	five period of Gastrodia elata	5.340
	SRR5643662	five period of Gastrodia elata	6.590
	SRR5643663	five period of Gastrodia elata	5.840
	SRR5643664	five period of Gastrodia elata	6.890
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.890
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.230
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.340
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	3.840
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.700
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	6.530
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	2.660
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.090
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	4.720
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.850
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	6.750
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	6.750
SRP279888	Gastro	Gastrodia elata tuber	6.55
	Juven	Juvenile tuber	4.53
	Mother_Gastro	Mother tuber of Gastrodia elata	21.59
	Mother_Juven	Mother tuber of Juvenile	9.21