Gene detail

Detail information of GWHGAAEX008814/evm.TU.scaffold_23.119

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|408491620\|ref\|YP_006867989.1\|	1.00E-66	glycosyltransferase, GTA_Type superfamily [Psychroflexus torquis ATCC 700755]
nr	gi\|743840052\|ref\|XP_010937167.1\|	0	PREDICTED: glucomannan 4-beta-mannosyltransferase 9-like [Elaeis guineensis]
Swissprot	tr\|Q8S7W0\|CSLA4_ORYSJ	0	Probable mannan synthase 4
trEMBL	tr\|W1PYY4\|W1PYY4_AMBTC	0	Uncharacterized protein {ECO:0000313\|EMBL:ERN13216.1}
TAIR	AT5G03760	0	Nucleotide-diphospho-sugar transferases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000025	2955354	3002937	+

Transcript Sequence
>GWHTAAEX008814 GGACCATGTAGCAATACTCTTTTTAAAAATAATTTAAAATATAAAAAATTGATTATGACCGTTTTCCAACGTTTCACGCTTTACAGCATAGGCGCAGCCGTTGGGTGGTTTCTTGGGTGCGCTTTCGGCGATGGAAAATTTTAGAACTGCACAGGACAGACTCCTAACGATTTAATCGAGGAAGAGGAAGGCCTCCGTGACGGAGAGCCAACTTGGAAATGGAGGCGAGGGCATTGGGAACGCCAGTACTCGTGCCTCTCGTCCCCGCCGGAGACGACAGAGGAGAATCCATGGTTTCTAATGGCGCTCTTTTCTTGGCCAGATCGATATATCGAGCAGTGGAGTCGATGGTTGTGTCGACGGACAGGATGCTTCCGAATTGGTATCGTGCGGCGTGGGAAGCTTTTCGGACGGCGGCTATTGCGCCGGCAATGAGCGCCGCTGTGGCAGTGTGCCTGGTGCTGTCAGTGATGCTTCTTGCGGAGGTGCTCTTTATGTCATTCGTGAGCCTCGCAGTGAAGCTCTTCCGCTTGACGCCGGAGAAGCGGTACAAATGGGAGGCGATCGGCGGCGATTTGGAGACGGGAAGCTCTAATTATCCCATGGTTCTTGTTCAAATCCCTATGTATAATGAGAAAGAGGTTTACAAGCTCTCGATTGGGGCGGCGTGCGGGCTTTCTTGGCCGTCGGATCGATTAATCATTCAGGTTCTCGATGATTCGACCGATCTGGAAGTTAAGGATTTGGTAGAACTTGAATGCAAGATTTGGGCAAGCAAAGGCATGAATATAGCATATGAGGTCAGAGGCAATAGGAAGGGATACAAGGCAGGTGCATTGAAAGAAGGGCTGGAGCATAGTTATGCCCAACAATGTGACTACGTTGTGATATTTGATGCTGATTTTCAACCAGAATCTAACTTTCTCGCCAGGACCATCCCTTTTCTGCTTCATAATCCAAAACTAGCTCTTGTTCAAGCACGTTGGGAGTTTGTGAATCCAAACGAGTGCCTGATGACAAGAATACAGCGGATGACCCTAGATTATCATTTTAAAGTGGAGCAGGAAGCTGGTTCATCCACATTTGCATTCTTTGGATTTAACGGCACTGCAGGGGTCTGGCGATTATCTGCCATCAAAGAGGCTGGAGGTTGGAATGACCGAACTACAGTGGAAGACATGGATTTGGCGGTTCGAGTGAGCCTCAAAGGTTGGAAATTTGTTTATGTTGGTGATCTGAAGGCCAAAAGTGAACTTCCCGGCTCCTTTACAGCCTATCGTCACCAGCAGCATCGCTGGACATGTGGGGCCGCAAATCTACTGAGGAAAACAGCCTATGAGATATGGATTACCAAGGACGTGTCTCTTTGGAAGAAGGTTTATCTGATATACAGCTTTTTCTTGGTGCGGAAGGTCATGTCGCATATTGTTACCTTTACGCTCTACTGTGTCATTATTCCGGCTTCTGTCTTGGTTCCAGAAGTTTCCATTCCAGCATGGGGAGTTGTTTACATTCCTACCAGCATCACAATTCTCAATGCAATCAGAAACTTTAGCTCTGTGCACATCATACCCTTTTGGATCCTTTTTGAAAATGTTATGGCCATGCACCGGGTGAAAGCAACCATTGTCGGCCTATGGGAGGCCGGAAGCGCCAACGAATGGGTTGTCACTGAAAAGCTTGGCGGAACCCTGAAAGAGAAACTTTTACCGGAAACCGCCCTAATCGAAAGGGCTTCCTCGAAGGCCAGTCACAGGTTTTACATGGCAGAGCTTGGGTTTGCTGTGTTTCTCTTCCTGTGTGCAAGCTATGATCTGACCTATGGGACGAATTATTACTACATATACATCTACCTGCAATCCATTGCCTTTTTTATCGTGGGTTTTGGTTATGTTGGCACTTTCATCTCTACTTCCTAAGCCTTCCATTCTGTCATTTTCTCCTTTTTGAAACCCTAAACATGAATATAATTTTTTTTCCTGTCAAAAAAGAGGCCGCACTTTTTTTTGGAGGCCCAACGTCTCTTAACTGAGTCGAGTGTAGGGAAGGTGCATCATCTTGATGAATGCATTCGTCTCTTGGCTCTTCGATTGTGATCGTGCAGTCGGGGTGCTCCGCCTCCTCCCCTGCAATGAATCTGGTTTGGGTATGCCTGTGTATTTGCATCGCGGTGCCTATGTTTAACAAAGAAGTATCAGAAATTGGTTTGTAGTAGTTGATTAGGGATATCAGCTTGCTTTTTACCCTAAATTCCTATCTTTTATATATTGGCGCATATTTAACCCATTTTATGAACAAAATTGCCTGAATTTTCCTTGAAAAATGGGTTATAACTGATTAAAAAGTTGGTTATAAAGGTATTGCATTGAAGGGGTTTGAAATTTTTGTGTTTGAAATAGATAAAATGATTTGGAGATCATAAAGAAGTAAGTTGGCTGAAGCTGTTATAGCGAATGAGAAATTTCTTCTGAAATGGGAAAAAGTAGTGCTATTTGTAGGGATATGGAATAGTCTTTCAAATCTTTTGGCAGTCTGAAAAACAGTGCTTATTAGGATTGCAGTATTTTATAATGTTGCCTGGGTTTTCTTTGAAGCATATTAGGCACATGCATAGCACACGCTTTTTAAAATGTGATTAATTGTGTTACTAATCAAGTTTTTAGTGGAAGTTTTATGTGTTTACTATTTTAAAAATATGCTTTAAATATGAAAATAAAGAAGCTT

Network for GWHGAAEX008814

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module3

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13632.5	Glyco_trans_2_3	221	411	6.10E-20

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	8.880
SRP064423	SRR2545915	Juvenile tuber	17.290
SRP108465	SRR5643513	five period of Gastrodia elata	5.040
	SRR5643514	five period of Gastrodia elata	8.740
	SRR5643515	five period of Gastrodia elata	7.260
	SRR5643524	five period of Gastrodia elata	8.220
	SRR5643525	five period of Gastrodia elata	9.430
	SRR5643528	five period of Gastrodia elata	9.370
	SRR5643658	five period of Gastrodia elata	11.630
	SRR5643659	five period of Gastrodia elata	18.650
	SRR5643660	five period of Gastrodia elata	17.620
	SRR5643661	five period of Gastrodia elata	13.800
	SRR5643662	five period of Gastrodia elata	17.240
	SRR5643663	five period of Gastrodia elata	26.000
	SRR5643664	five period of Gastrodia elata	16.960
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	9.910
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.720
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.440
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	6.410
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.910
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.480
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.500
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.690
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	4.540
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.930
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.170
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.170
SRP279888	Gastro	Gastrodia elata tuber	14.81
	Juven	Juvenile tuber	10.10
	Mother_Gastro	Mother tuber of Gastrodia elata	2.54
	Mother_Juven	Mother tuber of Juvenile	5.32