Detail information of GWHGAAEX008825/evm.TU.scaffold_23.132


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|357487157|ref|XP_003613866.1|1.03E-84NAC domain protein [Medicago truncatula]
Swissprottr|O49255|NAC29_ARATH9.00E-80NAC transcription factor 29
trEMBLtr|G7KGQ8|G7KGQ8_MEDTR4.00E-85NAC transcription factor-like protein {ECO:0000313|EMBL:AES96824.1}
TAIRAT1G694903.00E-79NAC-like, activated by AP3/PI

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002534446823445411-
Transcript Sequence

Network for GWHGAAEX008825

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02365.14NAM61312.20E-34
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNAC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms74.680
SRR2545915Juvenile tuber38.380
SRP108465SRR5643513five period of Gastrodia elata229.390
SRR5643514five period of Gastrodia elata164.720
SRR5643515five period of Gastrodia elata130.140
SRR5643524five period of Gastrodia elata136.240
SRR5643525five period of Gastrodia elata536.520
SRR5643528five period of Gastrodia elata259.110
SRR5643658five period of Gastrodia elata1314.960
SRR5643659five period of Gastrodia elata42.270
SRR5643660five period of Gastrodia elata70.160
SRR5643661five period of Gastrodia elata54.750
SRR5643662five period of Gastrodia elata184.980
SRR5643663five period of Gastrodia elata73.970
SRR5643664five period of Gastrodia elata146.390
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_196.420
SRR6049655Rhizomagastrodiae_C368-T10_good_156.230
SRR6049656Rhizomagastrodiae_C368-T07_good_190.560
SRR6049657Rhizomagastrodiae_C368-T07_good_1217.720
SRR6049658Rhizomagastrodiae_C368-T04_good_1271.870
SRR6049659Rhizomagastrodiae_C368-T04_good_1281.800
SRR6049660Rhizomagastrodiae_C368-T01_good_1112.110
SRR6049661Rhizomagastrodiae_C368-T04_good_1257.360
SRR6049662Rhizomagastrodiae_C368-T01_good_165.710
SRR6049663Rhizomagastrodiae_C368-T01_good_162.000
SRR6049664Rhizomagastrodiae_C368-T10_good_192.170
SRR6049665Rhizomagastrodiae_C368-T10_good_192.170
SRP279888GastroGastrodia elata tuber 48.47
JuvenJuvenile tuber102.36
Mother_GastroMother tuber of Gastrodia elata 85.71
Mother_JuvenMother tuber of Juvenile 27.16