Gene detail

Detail information of GWHGAAEX008831/evm.TU.scaffold_23.138

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|193212461\|ref\|YP_001998414.1\|	1.00E-11	glycoside hydrolase 15-like protein [Chlorobaculum parvum NCIB 8327]
nr	gi\|672169017\|ref\|XP_008804529.1\|	0	PREDICTED: uncharacterized protein LOC103717791 isoform X2 [Phoenix dactylifera]
trEMBL	tr\|M0TBP2\|M0TBP2_MUSAM	2.00E-164	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr6P30970_001}
TAIR	AT3G13000	2.00E-123	Protein of unknown function, DUF547

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000025	3679911	3753069	+

Transcript Sequence
>GWHTAAEX008831 ATGGTTCAAGTAAAGCTTCAGATAACAAAGATGCATTTAGATTTACCATTAGTTGATATGATAAGCGGAATCATCGTTAGCATGCAAAATGTTGTTAAGAATAGTCGATTGCCACCCCTCCTGCATGGTAAAATAGTCAACAATCTTAAGTATCTTCTCTTAAGCGAGAGAGCAGATGAGAAGAAGGTTGTTCAAGTGCAAGCTCTGGCTAATGCTGGTGCTTCTCTTCATGGCGGTTCAGTTAAACCAGACCGGTCGAAGCCGAGTGGAGGGCAGCAAGCTTCTGCCCTCCATGAAAATGGGTTACGAAAACGATCCCGGCAGTTGCAGACAAACCCTATTTGGAATACGAGAAAGGGAGAAAGAGATGCCATGCTGTGCTTGAAGGCGGAGGCACTGTGGGGAGAGACGCTTGATTCACAAGCTGCCGTTCCCCCCGTGAATCTGAGAAGTCCGATTCGGAAGGCGACGCGGAGAGGAGCGAGGAGAGATGGCGGAGGAGGATTAAAAGGCAATGTCGCATCTGATTCCTCTTCATCTCCCTCGAGTGGAGAAAGATGTCGGCATTCTGAGGAAACTAAAAGCATCATCCAAGGCCAAAAAGTAGATCCTGGAAAAATCACTTGTTGCTATAGACTCCAGCTAGAAAAAGAGGTTCAAATGTTGGAGAAACAACTTCAAGAAGAAATTGACTTGCATGCGGCTTTGGGAAACGCAGTGGCTAATACTGTTTTGCCTCTACCCAGGTTTCCAACCGAACTTCCAAGTAAGACTGAGGAGCTCATAGCTAGCATTGAAGTACTGGAAATAACAATTAAAAGGCTTGAAGAAGAACTCTTTGCCCTGCATTTTAGCCTTCAAAATGAAAGGCGGGAGCGGCGTGCTGCAGAAATCAATAAGGAATATATACAAATGTCTTCGCATACACCTCTTTCATCAAATTTGGGTTATATTTGGGAAGAACGTGCATCTTCCTCGGTAGTGTCAAAGCATGGTGGTCAAGTGCCTGCTTCAATCCACCATGGCGTTTTGCCAGGCAGTGAAGTTTTGCGGTGGCCAGTTCAAGGCCAACCGGAAACAATCCCAGTAAATGAGGTATTGGGGTCATGCAACGAGGAAAAAGAGAAAAGGCCTACAAATACTTCTTTGGTGAAAGGCTTTAAACTAAAGAACCTCGCGCCAATCCCCCACCCAAATATTCTTTCAGAAGAAATGGTCTTATCCATGAGAAATATTTTTCTTCGCTTGTCAATATCTACAACGAGCGCTTCCAGGACATCTTTGTCAGAGTGGTTATCTTGGCCTTCTTCCTCTGCTAGAAACCTCACCCGTTCCTTCACATCTTTGTCAGCTTCATCTAGGTTGCGAACTTCAGAATTGCTTTCTGGCTGTGAAATAAAGAATCAGGAAGGCTTATGCAATCCTTATGGAGTTAATAAGAGTATGACTTGGAGAGATGTTGGAAAGTATCGATTAGCGACCGAGGTGTCTTGGATGTCCATTGGAAAAGCACAACTTGAGTATGCTGCCGAGTCCTTAAAGAAGTTCAGGTGTATGGTGGAACAACTAGCAAGGGTTAGCCCAGACAGAATGACTAGTGATGAGAAGCTGGCTTTCTGGATTAACCTATATAATGCTTTAATAATGCACACTTATCTGGCATATGGAGTTCCTAAAAGTGACATCAAACTGTTCTCATTGATGCAAAAGGCATGCTATACTGTTGGAGGCCAATCCTTCAGCGCTCTAGATATCGAGTTCGTAATTTTGAAGATGAAACCTCCGGCACACCGTCCGCAGATTGCGTTGGCTTTGGCTCTGCACAAGTTCAAAACACCGGAGGAGCAGCGCGGAAAATGTTCTATCCACCACCCGGAACCTTTGGTCCTGTTTGCTCTCAGCTGCGGGATGCACTCCTGCCCTGCCGTGAGATTGTTCAGGCCGAGGAAGGTGAAGGAGGAGCTGAGAGAGTCCATGAAGGAGTACATCCAGGCATCGGTGGGCGTGAATGAGGAGGGGAAGCTGATGGTGCCTAAGCTGTTGTACTTGTTTGTGAGGGAGGCAGTGGAGGATTCCCTGCTTGTGGACTGGATTTGTCGCCACCTCAACCCCGCCCAACTCTCCTTCCTCAGGCACTCCGCCCCGCGCCTGCAGAGGCTTCTACGAGCCACCAGCTTCTGCGTTGTTCCCTTCGATTCCACCTTTCGGTACCTCTTCTTACCCCCTCAATAA

Network for GWHGAAEX008831

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14389.5	Lzipper-MIP1	211	289	1.30E-17
PF04784.13	DUF547	529	663	2.40E-39

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	10.400
SRP064423	SRR2545915	Juvenile tuber	11.200
SRP108465	SRR5643513	five period of Gastrodia elata	8.080
	SRR5643514	five period of Gastrodia elata	7.280
	SRR5643515	five period of Gastrodia elata	9.190
	SRR5643524	five period of Gastrodia elata	6.630
	SRR5643525	five period of Gastrodia elata	10.730
	SRR5643528	five period of Gastrodia elata	8.010
	SRR5643658	five period of Gastrodia elata	9.990
	SRR5643659	five period of Gastrodia elata	5.510
	SRR5643660	five period of Gastrodia elata	5.860
	SRR5643661	five period of Gastrodia elata	6.010
	SRR5643662	five period of Gastrodia elata	7.030
	SRR5643663	five period of Gastrodia elata	7.100
	SRR5643664	five period of Gastrodia elata	7.920
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	9.310
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	10.280
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	11.440
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	8.340
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	8.820
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	6.460
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	6.740
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	11.560
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	9.330
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	7.130
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	7.780
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	7.780
SRP279888	Gastro	Gastrodia elata tuber	6.83
	Juven	Juvenile tuber	6.39
	Mother_Gastro	Mother tuber of Gastrodia elata	7.80
	Mother_Juven	Mother tuber of Juvenile	9.58