Detail information of GWHGAAEX008833/evm.TU.scaffold_23.140


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG42671.00E-31Predicted membrane protein
nrgi|225463153|ref|XP_002267013.1|2.04E-45PREDICTED: glycine-rich RNA-binding protein 7 [Vitis vinifera]
Swissprottr|O64847|U136_ARATH4.00E-32UPF0136 membrane protein At2g26240
trEMBLtr|F6HGK6|F6HGK6_VITVI8.00E-46Putative uncharacterized protein {ECO:0000313|EMBL:CCB51352.1}
TAIRAT2G262401.00E-31Transmembrane proteins 14C

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002537760823783294+
Transcript Sequence

Network for GWHGAAEX008833

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03647.12Tmemb_141292201.40E-18
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms143.860
SRR2545915Juvenile tuber90.090
SRP108465SRR5643513five period of Gastrodia elata115.010
SRR5643514five period of Gastrodia elata117.540
SRR5643515five period of Gastrodia elata131.310
SRR5643524five period of Gastrodia elata114.660
SRR5643525five period of Gastrodia elata123.770
SRR5643528five period of Gastrodia elata116.820
SRR5643658five period of Gastrodia elata130.980
SRR5643659five period of Gastrodia elata137.100
SRR5643660five period of Gastrodia elata136.010
SRR5643661five period of Gastrodia elata156.950
SRR5643662five period of Gastrodia elata190.790
SRR5643663five period of Gastrodia elata148.810
SRR5643664five period of Gastrodia elata225.100
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1139.540
SRR6049655Rhizomagastrodiae_C368-T10_good_1140.710
SRR6049656Rhizomagastrodiae_C368-T07_good_1135.550
SRR6049657Rhizomagastrodiae_C368-T07_good_1164.730
SRR6049658Rhizomagastrodiae_C368-T04_good_1140.880
SRR6049659Rhizomagastrodiae_C368-T04_good_1147.460
SRR6049660Rhizomagastrodiae_C368-T01_good_1148.370
SRR6049661Rhizomagastrodiae_C368-T04_good_1154.390
SRR6049662Rhizomagastrodiae_C368-T01_good_1153.170
SRR6049663Rhizomagastrodiae_C368-T01_good_1141.460
SRR6049664Rhizomagastrodiae_C368-T10_good_1130.840
SRR6049665Rhizomagastrodiae_C368-T10_good_1130.840
SRP279888GastroGastrodia elata tuber 117.48
JuvenJuvenile tuber181.07
Mother_GastroMother tuber of Gastrodia elata 153.60
Mother_JuvenMother tuber of Juvenile 180.46