Detail information of GWHGAAEX008837/evm.TU.scaffold_23.144


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|435854087|ref|YP_007315406.1|1.00E-09hypothetical protein Halha_1368 [Halobacteroides halobius DSM 5150]
nrgi|672166864|ref|XP_008803370.1|2.93E-120PREDICTED: uncharacterized protein LOC103716941 isoform X3 [Phoenix dactylifera]
trEMBLtr|M0TT32|M0TT32_MUSAM8.00E-117Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P23790_001}
TAIRAT4G331405.00E-53Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002538184673837165+
Transcript Sequence

Network for GWHGAAEX008837

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06941.11NT5C1243182.80E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0009264Biological Processdeoxyribonucleotide catabolic process
GO:0008253Molecular Function5'-nucleotidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.710
SRR2545915Juvenile tuber19.090
SRP108465SRR5643513five period of Gastrodia elata36.680
SRR5643514five period of Gastrodia elata35.900
SRR5643515five period of Gastrodia elata34.560
SRR5643524five period of Gastrodia elata33.670
SRR5643525five period of Gastrodia elata109.710
SRR5643528five period of Gastrodia elata76.430
SRR5643658five period of Gastrodia elata116.300
SRR5643659five period of Gastrodia elata52.300
SRR5643660five period of Gastrodia elata64.630
SRR5643661five period of Gastrodia elata46.220
SRR5643662five period of Gastrodia elata55.780
SRR5643663five period of Gastrodia elata82.480
SRR5643664five period of Gastrodia elata62.840
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_140.340
SRR6049655Rhizomagastrodiae_C368-T10_good_128.490
SRR6049656Rhizomagastrodiae_C368-T07_good_133.730
SRR6049657Rhizomagastrodiae_C368-T07_good_152.160
SRR6049658Rhizomagastrodiae_C368-T04_good_139.780
SRR6049659Rhizomagastrodiae_C368-T04_good_135.890
SRR6049660Rhizomagastrodiae_C368-T01_good_137.030
SRR6049661Rhizomagastrodiae_C368-T04_good_134.670
SRR6049662Rhizomagastrodiae_C368-T01_good_124.990
SRR6049663Rhizomagastrodiae_C368-T01_good_122.990
SRR6049664Rhizomagastrodiae_C368-T10_good_127.680
SRR6049665Rhizomagastrodiae_C368-T10_good_127.680
SRP279888GastroGastrodia elata tuber 68.34
JuvenJuvenile tuber58.28
Mother_GastroMother tuber of Gastrodia elata 61.50
Mother_JuvenMother tuber of Juvenile 86.85