Detail information of GWHGAAEX008847/evm.TU.scaffold_23.154


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG42822.00E-68Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain
nrgi|672122054|ref|XP_008784347.1|3.61E-91PREDICTED: uncharacterized protein LOC103703309 [Phoenix dactylifera]
Swissprottr|Q9LJG8|ASIL2_ARATH5.00E-69Trihelix transcription factor ASIL2 {ECO:0000305}
trEMBLtr|F2CYX6|F2CYX6_HORVD6.00E-82Predicted protein {ECO:0000313|EMBL:BAJ88047.1}
TAIRAT3G141802.00E-68sequence-specific DNA binding transcription factors

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002541125824114488+
Transcript Sequence

Network for GWHGAAEX008847

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13837.5Myb_DNA-bind_4821744.30E-26
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTrihelix

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.430
SRR2545915Juvenile tuber9.270
SRP108465SRR5643513five period of Gastrodia elata23.860
SRR5643514five period of Gastrodia elata26.270
SRR5643515five period of Gastrodia elata23.600
SRR5643524five period of Gastrodia elata26.680
SRR5643525five period of Gastrodia elata25.780
SRR5643528five period of Gastrodia elata18.320
SRR5643658five period of Gastrodia elata20.830
SRR5643659five period of Gastrodia elata24.700
SRR5643660five period of Gastrodia elata24.320
SRR5643661five period of Gastrodia elata27.990
SRR5643662five period of Gastrodia elata29.260
SRR5643663five period of Gastrodia elata20.770
SRR5643664five period of Gastrodia elata22.300
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.080
SRR6049655Rhizomagastrodiae_C368-T10_good_133.240
SRR6049656Rhizomagastrodiae_C368-T07_good_123.270
SRR6049657Rhizomagastrodiae_C368-T07_good_119.720
SRR6049658Rhizomagastrodiae_C368-T04_good_116.540
SRR6049659Rhizomagastrodiae_C368-T04_good_115.890
SRR6049660Rhizomagastrodiae_C368-T01_good_119.980
SRR6049661Rhizomagastrodiae_C368-T04_good_116.490
SRR6049662Rhizomagastrodiae_C368-T01_good_127.140
SRR6049663Rhizomagastrodiae_C368-T01_good_120.940
SRR6049664Rhizomagastrodiae_C368-T10_good_127.220
SRR6049665Rhizomagastrodiae_C368-T10_good_127.220
SRP279888GastroGastrodia elata tuber 22.74
JuvenJuvenile tuber26.46
Mother_GastroMother tuber of Gastrodia elata 17.65
Mother_JuvenMother tuber of Juvenile 13.21