Gene detail

Detail information of GWHGAAEX008849/evm.TU.scaffold_23.157

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|436735917\|ref\|YP_007318045.1\|	4.00E-23	Abortive infection protein [Gloeocapsa sp. PCC 7428]
nr	gi\|743822756\|ref\|XP_010932356.1\|	0	PREDICTED: uncharacterized protein LOC105053048 [Elaeis guineensis]
trEMBL	tr\|M0SMI5\|M0SMI5_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr4P09680_001}
TAIR	AT2G03140_2	2.00E-157	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000025	4145151	4163608	-

Transcript Sequence
>GWHTAAEX008849 ATGAAAGATAAGGCAAGCCATGAAAAGTCTGATCAAGTAGATTGCGGGTCTAATGAGCAAAGGGATGATTGTGCGAAGAAGTCCAATGCCTTTGATGAAAAAATCCACCACAATCAAGTGCTTGAAGATGATTTAAATAATGGAAATGATGAGGCGGTTAATTCTTTGTCACAACTGAGTATATTGAGTTCAATTGATTCTAAAGAATCTCCAGCAGTCGGTTCTTCAGTGCATCAAATGCCATGGGAGAAGGGAAACCAGAAGTTCCATGATAATTCAGCTCAGGATGGTGGAGGACAAAATGTAGAGTTTTTCTTCAAGTCCAAAGAACCTTTGTCCCAATCTTCATTTTCAAAGTCCCATTCTATGAGTGTTTCCCAGGCATTAGATGCTTTAACAGGATTTGATGACTCCACACAAATGGCAGTCAATACGGTGTTTGGGGTAATAGAAAATCTGATTGATCAACTAGAAAAGAGCAACCAAAAAGGTGATGAAGCAAAAAAAAATGAAGAACAGGCTACTAGGAAGGGATTTAATGATGGTATTTTCATAAATGAAGAAAAATCCTATAATGTTGATTTTATCAAGCGAGAAACAAGGACGGGTTTGAGCCAACCAGCTAATCAAACAGAAAATCCTTTGAAGGAAGGTGGCATAGCATCTGATGAAGATAGACAAATAAAATTGGGACATAGAAAGGCCAAATTTGCCCTTGCACCTTCATCAGATAGGAGCATTATGCATTCTAAAAATGATATTGCAGCTAGTTTTTTGAGAAATACTAAGTTAAGAAAACATGGGGTTGCTGTAGATTTAACTCTAGATGCGGCCATGAAAAAATACTGGCTATCACCTTATGCAGCATACCTTCATAGATATATTAAGCCATTACCAAGCCGGAGTTTACTAGATCTGGAGATGGCGACAGATCTGTTTTTAGATCCAGAAGAAGACCAGTGGAAAATGATAGATCAACCATTAAGTTCTATGATAATAACAGGTCAGAATGGAAAGGACCAAAATGCTAATTTTGCATCAGGACCAAGGGATATGACTGTTATAGAACCGTCCAATGCAATACTTGATGACGAGTATTCAAAATTTAACAATGAATTATCTCAGGAGGATGATGATATAAATGACAATGAACAGGAAGATTCCATGAAAGAGAAGCAATTTTTTTTTATCAAAAACACTTTACTCGGTGTTTTAGAAGTTGAAATTCATCGAAGAATGAACATACCTGATTCAGAAGAAATTGACAGCCTTCATGCATTTGATTTAGAAAGCTTTACTGATAAAGTATCTCGGGCTATTGTGTCATGTGGTGAGTTCAACTCCTTAAAAGACAACTTATGTGACAAATTGGTAAAGTTGGAAACAGTGGAAAGGCAAAAAATTGTTGAAATCATATTGTCAGCATGGCAGGATACTAGCCACTTGAGAAAAGTTCTGTCATCTGATTTAGCTGTCTGTTCTAGCTTGGCATCTTTGAGAACATACTTTCAGGTTGTTGGTTTGTACGATAATGCAAAAAAACCTTTTTGTAAACCTGTAAATAAGCAGCAGAGATCTTGTGGTAATGAATATGACATTAAAAAGGAGCTTTCTGTGACAGAGAAAGTTGATAAGGCCGAGAATGAGCATCATTTGGATTCGGTTAAATCATCAAGTAAGAAGCATGAAGACCTTCAGTCCGCTGATTCGAATAATGGCTCCTTCATTTTTGGGCCTGCGACAACTGCTTTAGGGGCATCTACTTTACTAGAAAGCTGTCAGAAGACTGATGAAAAAAAGAATGCTGAAGAAATTTTAGATTATTCAAACAGAAGTTATTTCAGTGATGATGAATTTAGGCAAAAAAACATTGTTAGCAGCCTTGCTGAAAAATCCATGTTTGTCGCTTCTCCTGTAGTTCCCACGAAGTCTGATGGGAAGGTGGACCATGAAAGATTGGCTGCAATCCTGGCAGGATTAGGACAAAAGGGCGGGTTACTAAGGTCAGTTGGTAAAGTTGCTTTGCTTTGGGGTGGTATATACGGCGCTTTGAGATTGACGAATAAACTGATTACTTTTTTGCATATTGCTGAACGCCCTTTGTTTCAGAGGGTTTTCGGATTTGTTTGTATGGTGCTTGTGCTTTGGTCTCCAGTGGTAATACCTTTGCTGCCAGCTCTTGTACAAAGCTGGACAACACATAATCCAATCAGGATTGCAGAAGCTGCTTGTACTGTGGGTTTCTATATAGCTGCTATGATCCTTGTGATTTTGTGGGGAAAAAGAATACGTGGCTATGACAATCCAATTGAACAATATGGGCTGAACCTGACGACACCACCCAGGGTGTTTGATTTTCTAAAGGGCATGACTGGAGGATTTATGATAGTCTCATGCATTCATTTAATTAATGCATTATTAGGTTATGCTTATTTCACATGGCCAGCAATGCTACCTTTATTCTCGTCACATACTGTTGTTTCGTTGAGAGCTTGTGGGAGTCTGCTGCTCCTCATTATTCAAGGAATTGTTCCTGCAACTGGTATTTCTGTTGTAGAAGAATTATTGTTTAGGTCTTGGCTGCCTGAAGAAATAGCTGCTGACCTGGGATACAACTATTCTGTAATCATTTCTGGGATAATATTTGCTATAATTCAAAGCAGATCGCTGCCGTCCGTTCTGGGATTCTTGCTCCTATCAATTTGTCTGTCCGGCATCAAACAAAGAGCTGATGGCAAACTAGCCATCCCCATCGGCATCCGCACTGGGGTGATGGCAGCCAGTTTTGTCGTACAGAGAGGGGATTTGTTGGGCTATAGGGCCGGGACTCCTCCCTGGCTTGCCGGACCCCATCACCTGCATCCTTTTGATGGGCCTGTGGGCGTGGCTTTATGCGCGCTGCTCGCCATCCTCTTCTTCCCTAAACTTCCACATAGGAAGAAGATTCATAGGCCTATTCGGAAAGGAAAATGTTGA

Network for GWHGAAEX008849

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02517.15	Abi	841	921	1.00E-05

Protein Sequence

>GWHPAAEX008849
MKDKASHEKSDQVDCGSNEQRDDCAKKSNAFDEKIHHNQVLEDDLNNGNDEAVNSLSQLSILSSIDSKESPAVGSSVHQMPWEKGNQKFHDNSAQDGGGQNVEFFFKSKEPLSQSSFSKSHSMSVSQALDALTGFDDSTQMAVNTVFGVIENLIDQLEKSNQKGDEAKKNEEQATRKGFNDGIFINEEKSYNVDFIKRETRTGLSQPANQTENPLKEGGIASDEDRQIKLGHRKAKFALAPSSDRSIMHSKNDIAASFLRNTKLRKHGVAVDLTLDAAMKKYWLSPYAAYLHRYIKPLPSRSLLDLEMATDLFLDPEEDQWKMIDQPLSSMIITGQNGKDQNANFASGPRDMTVIEPSNAILDDEYSKFNNELSQEDDDINDNEQEDSMKEKQFFFIKNTLLGVLEVEIHRRMNIPDSEEIDSLHAFDLESFTDKVSRAIVSCGEFNSLKDNLCDKLVKLETVERQKIVEIILSAWQDTSHLRKVLSSDLAVCSSLASLRTYFQVVGLYDNAKKPFCKPVNKQQRSCGNEYDIKKELSVTEKVDKAENEHHLDSVKSSSKKHEDLQSADSNNGSFIFGPATTALGASTLLESCQKTDEKKNAEEILDYSNRSYFSDDEFRQKNIVSSLAEKSMFVASPVVPTKSDGKVDHERLAAILAGLGQKGGLLRSVGKVALLWGGIYGALRLTNKLITFLHIAERPLFQRVFGFVCMVLVLWSPVVIPLLPALVQSWTTHNPIRIAEAACTVGFYIAAMILVILWGKRIRGYDNPIEQYGLNLTTPPRVFDFLKGMTGGFMIVSCIHLINALLGYAYFTWPAMLPLFSSHTVVSLRACGSLLLLIIQGIVPATGISVVEELLFRSWLPEEIAADLGYNYSVIISGIIFAIIQSRSLPSVLGFLLLSICLSGIKQRADGKLAIPIGIRTGVMAASFVVQRGDLLGYRAGTPPWLAGPHHLHPFDGPVGVALCALLAILFFPKLPHRKKIHRPIRKGKC

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0071586	Biological Process	CAAX-box protein processing
GO:0004197	Molecular Function	cysteine-type endopeptidase activity
GO:0030176	Cellular Component	integral component of endoplasmic reticulum membrane
GO:0016020	Cellular Component	membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	11.550
SRP064423	SRR2545915	Juvenile tuber	7.600
SRP108465	SRR5643513	five period of Gastrodia elata	3.840
	SRR5643514	five period of Gastrodia elata	4.720
	SRR5643515	five period of Gastrodia elata	4.890
	SRR5643524	five period of Gastrodia elata	4.890
	SRR5643525	five period of Gastrodia elata	5.510
	SRR5643528	five period of Gastrodia elata	6.380
	SRR5643658	five period of Gastrodia elata	5.460
	SRR5643659	five period of Gastrodia elata	4.480
	SRR5643660	five period of Gastrodia elata	5.410
	SRR5643661	five period of Gastrodia elata	3.260
	SRR5643662	five period of Gastrodia elata	4.290
	SRR5643663	five period of Gastrodia elata	4.200
	SRR5643664	five period of Gastrodia elata	4.580
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.590
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.530
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.650
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.340
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	5.620
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	5.920
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	5.660
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.540
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.270
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.490
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.810
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.810
SRP279888	Gastro	Gastrodia elata tuber	6.65
	Juven	Juvenile tuber	6.38
	Mother_Gastro	Mother tuber of Gastrodia elata	8.18
	Mother_Juven	Mother tuber of Juvenile	9.30