Gene detail

Detail information of GWHGAAEX008850/evm.TU.scaffold_23.158

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|333986171\|ref\|YP_004515381.1\|	1.00E-16	alpha/beta hydrolase [Methylomonas methanica MC09]
KOG	KOG1838	3.00E-134	Alpha/beta hydrolase
nr	gi\|743822756\|ref\|XP_010932356.1\|	0	PREDICTED: uncharacterized protein LOC105053048 [Elaeis guineensis]
Swissprot	tr\|Q40863\|EMB8_PICGL	1.00E-36	Embryogenesis-associated protein EMB8
trEMBL	tr\|K4A377\|K4A377_SETIT	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Si033330m}
TAIR	AT2G03140_1	3.00E-134	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000025	4163651	4179513	-

Transcript Sequence
>GWHTAAEX008850 ATGTCAGCGTCTGCGAACCTCTACTGCTTCTGCCCTCATCAGAATTATAGTCCCTCTTCTGCAAAGCGCCGGCCACCGTCAATCAACCACCGTGACCTCCGTCGTTGGCGACGGAGAAGGGCGGCGGAGTTGCGGTGCCAATTCGGCCTTGAAAACCTCTTCAGCACGCTCAGCTCTATTCAACCTCTTGAACTTCTTGCTCCAGTCCTCGGCCTTGCCTCCGTTGCCGCAGCGGTCTACCTCCATCGTTCTCTTCGTTCCCCTAATGGCCAAGCCTCTTTTGTCGAATGGGCTCTGCTCACTAGTCCGACGCCTTTCAATCGGCGTGTGCTCCTTCGATGCCCCTCTGTATCGCTTGAGGATTGCGTCGAATCAGAGAGCAGCGTGAATGCCGTCAGTCTGTGCAAGGGCAGGGTTCCGTTTAAGGATGAAGGGGACGCTGTGCTTGAGGGGGATCTTGAATTTCAGAGGATTTATCTGAGCACGGAAGACGGTGGGGTTATTTCGTTGGATTGGCCGGATTACTTGGATTTGGAGAGGGAGAAGGGGTTGGACACTACTGTATTGATCATTCCGGGTACACCGAAAGGGAGCATGGATAGGAATGTGGGATTGTTTGTGCTTGATGCTGTTAAGCATGGGTTCTTTCCAATTGTGATGAATCCCAGGGGATGTGCAGGTTCATCCTTGACAACTGCAAGGTTATTTACTGCTGCTGATAGTGATGACGTCTGTACAGCAGTCAAATTTGTCAGCAAGATAAGGCCATGGACAACCATGATGGGTATTGGCTGGGGATATGGGGCAAGCATGCTGACAAAATATCTTGCTGAGAATGGAGAATCAACCCAAATTGTTGCGGTTGTTTGCATAGATACTCCATTTGACTTGGATGAATTTACCAAGTCATCACTTTATAATATTGCCATGAATGAGAAGTTAACTTGTGGGCTGAGGGAAATCCTGCGAGCAAATAAGGAACTGTTTCAAGGTACAAATAAAGGTTTTGAAGTTTCAAAAGCTTTATCTTCTACATCCATTCGTGAATTTGATGCAGCAATTTCAATGATTTCTTATGGGTTTGGTTCTCTCGAGGACTTCTATAGAAAATCCAGCACGAGACAATCAATTGGAAAATTGAAGATCCCAGTTCTATTCATACAGAGCAATGATGCAACCGTATCGCTTTTCTCTGTTCCACGAAGCTCCATCACAGATAATTTGTTTACAAGTTTGCTTCTTTGTTCTTGTTCACATTCAACCATTGACAAAGATGCTCGATCTGCTCTTCTTTGGTGCCAACAAATTTCTATTGAGTGGCTCTCAGCAGTGGAGCATACTCTTGTAAAGGGCCACTATTTTCTTCAAAATGATCTGAATATCACCATAGAATCGCCTAATGGCTCATCATTTGAAATTGAAGATGAGTTTATAGCGGCTAGAAGTAATCACAAAGGTTTTGATCCGTCTCAGTTATTATTAACTCATGACCATGGAAATGTGGAATCTTTCCTGAAACCCAACTGTTCTGGTACTATAAGTGGGCTCATTGTCGGCTCGTGCAATACTGAAGTTAATGAAGACGGTGGTGCACCTTATGATACTGCTTCAGGTCACACGAAGTTTAGAAACCAAATTTATGAAATAGAGAGCGACATTGAAGCCGGAACAGAAGATGACAAAAATGAGAAGTGCAACACTGATAAGGACATTTCAACTGAAAATGTGGTAAATAGTGAAGGAAATCAAGTCACGCAAACTGCAGCTGTGATGATGAACATTCTTGATGCTGCCATGCCTGGTACTCTAGATGATGAGGAGAAGAAAAAGATTCTGGGTACCATGGAAAAGGGGGAAACATTCATGAAAGCTCTGCAAGGAGCCGTACCGGACGACGTGCGTGGAAAGATCACAACCGCTGTTGCTGAAATTATGCAATGCCAAGGTGCCAACTTAAATCTTAACGTAGTCAAAGAGACTGGTTGGACTCCGAACGTGACTTTAGAGCATACGTCAAAGATTTATGGAAATCTCAAAGAAAGTTTTCTTAAAGAATTAGACTGTGATGAAACTCCCTTGGAGCAAGCAAAATTTGACAAGTCAGATGATACTAGGTGTGAAGGGCCCTTTACTTTTTAA

Network for GWHGAAEX008850

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	7.370
SRP064423	SRR2545915	Juvenile tuber	5.120
SRP108465	SRR5643513	five period of Gastrodia elata	2.850
	SRR5643514	five period of Gastrodia elata	4.090
	SRR5643515	five period of Gastrodia elata	3.950
	SRR5643524	five period of Gastrodia elata	4.340
	SRR5643525	five period of Gastrodia elata	4.510
	SRR5643528	five period of Gastrodia elata	3.430
	SRR5643658	five period of Gastrodia elata	3.240
	SRR5643659	five period of Gastrodia elata	3.470
	SRR5643660	five period of Gastrodia elata	4.390
	SRR5643661	five period of Gastrodia elata	3.510
	SRR5643662	five period of Gastrodia elata	2.760
	SRR5643663	five period of Gastrodia elata	3.490
	SRR5643664	five period of Gastrodia elata	3.900
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	3.310
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.140
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	3.120
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	3.560
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.450
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.350
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.240
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.050
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	3.390
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.520
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	2.270
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	2.270
SRP279888	Gastro	Gastrodia elata tuber	4.81
	Juven	Juvenile tuber	5.01
	Mother_Gastro	Mother tuber of Gastrodia elata	3.90
	Mother_Juven	Mother tuber of Juvenile	8.19