Gene detail

Detail information of GWHGAAEX008855/evm.TU.scaffold_23.164

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG2088	Predicted lipase/calmodulin-binding heat-shock protein
nr	gi\|743774218\|ref\|XP_010917459.1\|	PREDICTED: uncharacterized protein LOC105042051 [Elaeis guineensis]
trEMBL	tr\|M0T0S7\|M0T0S7_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P22520_001}
TAIR	AT3G14070_1	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000025	4338594	4369766	+

Transcript Sequence
>GWHTAAEX008855 CGACGAGCTATATTTATTTAAATATAATAAAGTGCTGGTACTTTAATAGAACTATTCATCTGTTTTCTAGGTTTCGCCAACCTCAGCAGTTCCGCGAACCGTCGGCGATTTTCGGCGAATCCTTCCATCGAGGGGGCTTGGGAGAGCCTTATTTAGCCCTAGACCCTCCACGAACCTACCTCGTTAACTCCTCCAAGTACCCCCATCTTCTTAGTCCTCCCCTCTCACCGACACCCAATCGACAATCCCTAGCCATCTCCGGCCACCTCTTCTACGCCGGGAAGGCTTAATCAGCGCCTCATACGTTTCGGCGGAGGAAACTGGTATCGCTGCAGCAGCTACACAGAAGGGCCAAAACCCTACCGATCGGCGCTCTCAATTATCAACGTAATTCTAGGCAAATCGTTGCAAGAAGTTGAACCCTGCCTGCTTTCTTCCGTTCAACGCGTTATTTTGATTTCCGGACACTAACAAAACCGTGCCTTGGGGGTTTTAGTTTAGAAAGTTAAGCTCTTTTCTATTTGGATTGGTCAACTGAAACTTGAAAAGAATGGCCACGGCCACTATGGCCACTGCAGCTGGTGCTGCCGCTCTACTTTACTACACACTGAGCAGAAGATTACAGACAGAATCTTCTAGGGATCATAGAGAGGGGGAAGAACGTTTTGATGGATCTAGGAATGCTACTGGTGTGAACAGGATTTCTCGGAGACCGATGCGAGCACCAGCTACGTGGATGGAAACAATATCAACCCTATCAGAGACTTTGAGATTTACTTACTCGGAGACTCTGGGAAAGTGGCCGATAGGGGATTTGGCTTTTGGTATCAATTTTCTCCTTAAGAGGCAGGGAAACTTAGATGTTTCTAGTATATATGCCGGAGATAATTCTGTACAGCTTAGAGGACCAAAAATCACTGCCGAGCTAACATATCTTTTAAATTTATTGTCTCTTTGTTGGCATTTTTCAAAAAAGCCATTCCCATTATTTCTGAAGGAAACTGGTTTTTCTCAAGACGACGTTCTACTTCAGGAGCCTAAAGCAGGGATATTGAAGCCAGCTTTTACAATTTTAATTGACAGACGCACTGAAACCATCCTTCTTCTTATCCGTGGAACTCATAGTATAAGGGATACTTTGACAGCTGCAACTGGTGCTGTCGTGCCCTTTCATCATACAATTGTACAGAAGGGTGGTGTTAGCGATTTAGTTCTAGGCTACGCACACTGTGGAATGGTTGCAGCTGCAAGGTGGATTGCAAAGATTGCAACTCCATGTCTGACAAAAGCAATTAACGATTTTCCTGATTACCAGTTAAAGGTTGTTGGACACTCTCTTGGTGGTGGTACTGCCGCACTCCTAACATATATTTTAAGGGAGAAGCAGGTGTTTGCAGCAGCTTCTTGTGTTTCATTTGCTCCAGCTGCTTGCATGACATGGGACTTAGCAGATTCAGGCACGCATTTTATAACTTCAGTTATTAATGGAGCTGACTTGGTTCCTACATTCTCAGCAGCATCCGTAGATGACTTGCGCTCTGAGGTAACAGCTTCTGCATGGTTAAACGATCTAAGAAGTCAAATAGAGCAAACAAGAATCTTGAGTACGGTCTATCGTTCGGCTTCTGCTTTGGGTTCTCGATTACCATCAATTGCTAGTGCTAGAGCTAGAGTAGCTGGCGCTGGTTTAATTCTTCGCCCAGTCTCCAATGGGACACAGGTCGTAATGAAAAGGGCTCGGAATGTTGCCCAGGCAGCTTGGACCAGTCAATCTCTCCGAATATCATCATGGTCGTGCATTGGCCCTCGTCGTCGGCAGACCACTGCCTCCGTATCTACTTCCGTCTCATCAAGATCAGATGAAACCATGACCAGACCCTCTGCCTCAAGAGATGATGAGGCGGCAGATCCTTTTATGGCCCCAAACAAAACTGTCATGGAAGGGAGCACAAGCATAATGACAGTCTCCGAAATCGAAGAAATCTCCGAGGGAGAAACTGACGAGGAGGAGGAAAGAATGACAGAGGTGGAGCTCTGGCAGCAACTTGAGAGCGAGCTATGCAGAGAAAGGGGCGAAGGAGAAGAGGAGGAGGCCTACCTTTCAAGGGAGATAAGGGACGAGGAAGAAATTGCTGCTGCTGCTGCTGCCGTGACTGAGGAAGTGGAGACGGGTGCTTCCAGCAGCTTACTTTCGGTTGGGACAACTAAAGAGGTCCACCGTTTCTTTCCGCCCGGGAGAATAATTCACATTGTCACTTTTCTACCAAAGGAACAAGCACATGAGGGGACGGCGGAGAATGCTGCCTGCGGTATCATTGATGCCGAATTCGAGCACGGGAAGCCAGGTATTGGGGTATTTCAGACTCCAAGATCTCTGTATGGAAAATTGAGGCTGTCTCAGGCCATGATTAATGATCACTACATGCCAGTTTATAGAAGGAATATGGAGAAGCTGATCAGTGAGCTTGTGAAGGAGGCTTCATCAGAGGAATGTCATTTTAAAGATAGGTTGTTGTAGCTAAAATCACTTTGTTCATCATTTTATCCAAATGATGTTTTTCTATTTTTTTTAGGTTTTTATTTGTTGTTTTCTGCATGTAATGTTGTATGTATGTATATATTCATGGGACTGATAACTGAAGGATAGTATATAAATATCGCTAAACATTATCATTTACAATGTTATATAATGCCACATTAAATTTTTTTAATGTTGCTGGTTGTTGAGCTTATCATTGCAATCTTCTGAATGATGAGCATCAGTGGAATACTACATCATCATCACTTTTTTT

Network for GWHGAAEX008855

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03893.15	Lipase3_N	50	129	3.40E-19
PF01764.24	Lipase_3	185	322	2.30E-21

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016042	Biological Process	lipid catabolic process
GO:0006629	Biological Process	lipid metabolic process

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	30.700
SRP064423	SRR2545915	Juvenile tuber	41.030
SRP108465	SRR5643513	five period of Gastrodia elata	32.810
	SRR5643514	five period of Gastrodia elata	30.580
	SRR5643515	five period of Gastrodia elata	37.360
	SRR5643524	five period of Gastrodia elata	32.280
	SRR5643525	five period of Gastrodia elata	40.870
	SRR5643528	five period of Gastrodia elata	39.300
	SRR5643658	five period of Gastrodia elata	39.760
	SRR5643659	five period of Gastrodia elata	31.980
	SRR5643660	five period of Gastrodia elata	41.370
	SRR5643661	five period of Gastrodia elata	37.980
	SRR5643662	five period of Gastrodia elata	38.530
	SRR5643663	five period of Gastrodia elata	37.910
	SRR5643664	five period of Gastrodia elata	39.620
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	27.950
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	29.400
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	24.840
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	30.010
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	34.870
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	37.240
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	26.670
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	31.360
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	23.860
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	29.670
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	24.210
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	24.210
SRP279888	Gastro	Gastrodia elata tuber	45.64
	Juven	Juvenile tuber	62.26
	Mother_Gastro	Mother tuber of Gastrodia elata	57.30
	Mother_Juven	Mother tuber of Juvenile	100.11